Aliases for HRAT92 Gene

Subcategory (RNA class) for HRAT92 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for HRAT92 Gene

  • Heart Tissue-Associated Transcript 92 3
  • Novel Transcript 5
  • NONHSAG046735 92
  • HSALNG0055544 167
  • Lnc-DNAAF5-3 168
  • AC147651.1 5

External Ids for HRAT92 Gene

Summaries for HRAT92 Gene

GeneCards Summary for HRAT92 Gene

HRAT92 (Heart Tissue-Associated Transcript 92) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HRAT92 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HRAT92 Gene

Genomics for HRAT92 Gene

GeneHancer (GH) Regulatory Elements for HRAT92 Gene

Promoters and enhancers for HRAT92 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J000511 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 549.5 -1.6 -1569 12.1 HNRNPK CTCF SIN3A NRF1 POLR2G USF1 JUND TEAD4 ZFX ZIC2 HRAT92 PDGFA GET4 lnc-PRKAR1B-1 ENSG00000234471
GH07J000523 Enhancer 0.9 ENCODE dbSUPER 58.2 +4.6 4576 0.2 NCOR1 TAL1 STAT5A FOXM1 NRF1 TCF12 GATA2 ZNF18 DPF2 MEIS2 HRAT92 PDGFA PRKAR1B-AS2
GH07J000489 Enhancer 1.1 Ensembl ENCODE dbSUPER 42.1 -27.9 -27853 3.1 TEAD4 EP300 ZIC2 TCF7 MEF2C OSR2 BCL11A ESRRA TCF12 CTCF HRAT92 PDGFA ENSG00000234471 lnc-FAM20C-12
GH07J000501 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 28.8 -13.5 -13511 9.3 NCOR1 ZIC2 KDM6A TCF7 SKI TEAD1 TBX3 ZNF341 ZSCAN9 NR2F2 HRAT92 PDGFA GET4 CYP2W1 ENSG00000234471 lnc-PRKAR1B-1
GH07J000486 Enhancer 1.1 ENCODE CraniofacialAtlas dbSUPER 29 -34.4 -34439 1.4 ZIC2 SRSF1 FOXA2 ZFHX2 MNT SMAD4 ZNF511 BCL6 GLIS1 RARA HRAT92 ENSG00000240859 lnc-FAM20C-12 RF00017-5946 ENSG00000234471
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HRAT92 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HRAT92 Gene

Genomic Locations for HRAT92 Gene
chr7:519,303-530,311
(GRCh38/hg38)
Size:
11,009 bases
Orientation:
Plus strand
chr7:560,028-564,869
(GRCh37/hg19)
Size:
4,842 bases
Orientation:
Plus strand

Genomic View for HRAT92 Gene

Genes around HRAT92 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HRAT92 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HRAT92 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HRAT92 Gene

Proteins for HRAT92 Gene

Post-translational modifications for HRAT92 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HRAT92 Gene

Domains & Families for HRAT92 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HRAT92 Gene

Function for HRAT92 Gene

Phenotypes From GWAS Catalog for HRAT92 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HRAT92 Gene

Localization for HRAT92 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HRAT92 Gene

Pathways & Interactions for HRAT92 Gene

PathCards logo

SuperPathways for HRAT92 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for HRAT92 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HRAT92 Gene

Drugs & Compounds for HRAT92 Gene

No Compound Related Data Available

Transcripts for HRAT92 Gene

mRNA/cDNA for HRAT92 Gene

28 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
9 NONCODE transcripts :
4 LncBook transcripts :
25 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for HRAT92 Gene

No ASD Table

Relevant External Links for HRAT92 Gene

GeneLoc Exon Structure for
HRAT92

Expression for HRAT92 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for HRAT92

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HRAT92 Gene

Orthologs for HRAT92 Gene

Evolution for HRAT92 Gene

ENSEMBL:
Gene Tree for HRAT92 (if available)
TreeFam:
Gene Tree for HRAT92 (if available)

No data available for Orthologs for HRAT92 Gene

Paralogs for HRAT92 Gene

No data available for Paralogs for HRAT92 Gene

Variants for HRAT92 Gene

Additional dbSNP identifiers (rs#s) for HRAT92 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HRAT92 Gene

Disorders for HRAT92 Gene

No disorders were found for HRAT92 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HRAT92 Gene

Publications for HRAT92 Gene

No publications were found for HRAT92 Gene.

No data available for Mastermind for HRAT92 Gene

Products for HRAT92 Gene

Sources for HRAT92 Gene