Aliases for HOXA-AS2 Gene
Subcategory (RNA class) for HOXA-AS2 Gene
non-coding RNA
Quality Score for this RNA gene is
3
Aliases for HOXA-AS2 Gene
External Ids for HOXA-AS2 Gene
- HGNC: 43745
- Entrez Gene: 285943
- Ensembl: ENSG00000253552
- OMIM: 616068
Previous GeneCards Identifiers for HOXA-AS2 Gene
- GC07P027151
Summaries for HOXA-AS2 Gene
-
This gene produces a long non-coding RNA that promotes cell proliferation. This transcript may interact with enhancer of zeste homolog 2 Polycomb repressive complex to repress gene expression. [provided by RefSeq, Dec 2017]
GeneCards Summary for HOXA-AS2 Gene
HOXA-AS2 (HOXA Cluster Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for HOXA-AS2 Gene
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HOXA-AS2 Gene
Genomics for HOXA-AS2 Gene
GeneHancer (GH) Regulatory Elements for HOXA-AS2 Gene
Promoters and enhancers for HOXA-AS2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around HOXA-AS2 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for HOXA-AS2 Gene
Genomic Locations for HOXA-AS2 Gene
- chr7:27,107,777-27,134,302
- (GRCh38/hg38)
- Size:
- 26,526 bases
- Orientation:
- Plus strand
- chr7:27,147,396-27,173,921
- (GRCh37/hg19)
Genomic View for HOXA-AS2 Gene
Genes around HOXA-AS2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 7p15.2 by Ensembl
- 7p15.2 by Entrez Gene
- 7p15.2 by HGNC
HOXA-AS2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HOXA-AS2 Gene
Proteins for HOXA-AS2 Gene
Post-translational modifications for HOXA-AS2 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HOXA-AS2
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HOXA-AS2
- Origene Custom Protein Services for HOXA-AS2
- Search GeneTex for Proteins for HOXA-AS2
No data available for DME Specific Peptides for HOXA-AS2 Gene
Domains & Families for HOXA-AS2 Gene
Gene Families for HOXA-AS2 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HOXA-AS2 Gene
Function for HOXA-AS2 Gene
Phenotypes From GWAS Catalog for HOXA-AS2 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for HOXA-AS2
-
- Search ViGene Biosciences for HOXA-AS2
CRISPR Products
- Browse CRISPR knockouts for HOXA-AS2
- Applied Biological Materials CRISPR for HOXA-AS2
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for HOXA-AS2
Inhibitory RNA Products
- Search ViGene Biosciences for HOXA-AS2
Clone Products
- GenScript: Custom all cDNA clones Services for HOXA-AS2
- VectorBuilder custom plasmid, inducible vectors for HOXA-AS2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HOXA-AS2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for HOXA-AS2
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HOXA-AS2 Gene
Localization for HOXA-AS2 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HOXA-AS2 Gene
Transcripts for HOXA-AS2 Gene
mRNA/cDNA for HOXA-AS2 Gene
- (7) Additional mRNA sequences :
- (11) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for HOXA-AS2 Gene
CRISPR Products
- Browse CRISPR knockouts for HOXA-AS2
- Applied Biological Materials CRISPR for HOXA-AS2
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for HOXA-AS2
Inhibitory RNA Products
- Search ViGene Biosciences for HOXA-AS2
Clone Products
- GenScript: Custom all cDNA clones Services for HOXA-AS2
- VectorBuilder custom plasmid, inducible vectors for HOXA-AS2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HOXA-AS2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for HOXA-AS2
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for HOXA-AS2 Gene
SOURCE GeneReport for Unigene cluster for HOXA-AS2 Gene:
Hs.714774Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HOXA-AS2 Gene
Orthologs for HOXA-AS2 Gene
No data available for Orthologs for HOXA-AS2 Gene
Paralogs for HOXA-AS2 Gene
No data available for Paralogs for HOXA-AS2 Gene
Variants for HOXA-AS2 Gene
| SNP ID | Clin | Chr 07 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000816682 | -- | 27,121,342(+) | G/A | upstream_transcript_variant | |
| rs1000910670 | -- | 27,125,543(+) | C/G | intron_variant | |
| rs1000960518 | -- | 27,127,498(+) | T/C | intron_variant | |
| rs1001379085 | -- | 27,128,387(+) | T/A | non_coding_transcript_variant | |
| rs1001544497 | -- | 27,128,830(+) | A/G | downstream_transcript_variant |
Additional Variant Information for HOXA-AS2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HOXA-AS2
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HOXA-AS2 Gene
Disorders for HOXA-AS2 Gene
Additional Disease Information for HOXA-AS2
No disorders were found for HOXA-AS2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HOXA-AS2 Gene
Publications for HOXA-AS2 Gene
- HOX antisense lincRNA HOXA-AS2 is an apoptosis repressor in all trans retinoic acid treated NB4 promyelocytic leukemia cells. (PMID: 23649634) Zhao H … Newburger PE (Journal of cellular biochemistry 2013) 2 3 58
- Long noncoding RNA HOXA-AS2 represses P21 and KLF2 expression transcription by binding with EZH2, LSD1 in colorectal cancer. (PMID: 28112720) Ding J … Wang K (Oncogenesis 2017) 3 58
- Upregulation of long non-coding RNA HOXA-AS2 promotes proliferation and induces epithelial-mesenchymal transition in gallbladder carcinoma. (PMID: 28388535) Zhang P … Gao Y (Oncotarget 2017) 3 58
- Long non-coding RNA HOXA-AS2 promotes proliferation and invasion of breast cancer by acting as a miR-520c-3p sponge. (PMID: 28545023) Fang Y … Zhang Q (Oncotarget 2017) 3 58
- Knockdown of HOXA-AS2 suppresses proliferation and induces apoptosis in colorectal cancer. (PMID: 29118916) Tong G … Wang S (American journal of translational research 2017) 3 58
Products for HOXA-AS2 Gene
- Browse R&D Systems for Antibodies
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- Browse R&D Systems for biochemical assays
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- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for HOXA-AS2
- VectorBuilder custom plasmid, inducible vectors for HOXA-AS2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HOXA-AS2
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for HOXA-AS2
- Search GeneTex for Proteins for HOXA-AS2
- Search ViGene Biosciences for HOXA-AS2
Sources for HOXA-AS2 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems