Aliases for HNRNPRP1 Gene

Aliases for HNRNPRP1 Gene

  • Heterogeneous Nuclear Ribonucleoprotein R Pseudogene 1 2 3 5
  • HNRNPRP1 5

External Ids for HNRNPRP1 Gene

Previous GeneCards Identifiers for HNRNPRP1 Gene

  • GC10M021914

Summaries for HNRNPRP1 Gene

GeneCards Summary for HNRNPRP1 Gene

HNRNPRP1 (Heterogeneous Nuclear Ribonucleoprotein R Pseudogene 1) is a Pseudogene.

Additional gene information for HNRNPRP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HNRNPRP1 Gene

Genomics for HNRNPRP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HNRNPRP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J021624 Enhancer 0.4 Ensembl 250.7 +1.0 955 1.2 RBM22 RFX1 ZNF7 BMI1 HNRNPRP1 lnc-SKIDA1-1 RNU6-1141P RNU6-306P MIR1915 MIR1915HG piR-41306-027 NONHSAG005377.2 SKIDA1 MLLT10
GH10J021626 Enhancer 0.3 Ensembl 250.7 -0.1 -145 0.2 PRDM6 MAFK HNRNPRP1 lnc-SKIDA1-1 RNU6-1141P RNU6-306P MIR1915 MIR1915HG RF00026-123 NONHSAG005377.2 MLLT10 SKIDA1
GH10J021628 Enhancer 0.3 Ensembl 250.7 -0.5 -545 0.2 PRDM6 HNRNPRP1 lnc-SKIDA1-1 RNU6-1141P RNU6-306P MIR1915HG MIR1915 RF00026-123 NONHSAG005377.2 MLLT10 SKIDA1
GH10J021627 Enhancer 0.2 ENCODE 250.7 -1.4 -1412 0.4 HNRNPRP1 lnc-SKIDA1-1 RNU6-1141P RNU6-306P MIR1915 MIR1915HG MLLT10 RF00026-123 NONHSAG005377.2 SKIDA1
GH10J022433 Promoter/Enhancer 1.6 FANTOM5 ENCODE CraniofacialAtlas 4.8 -809.9 -809868 5.6 BCLAF1 SP1 JUND ATF2 POLR2A CEBPA ZNF10 CEBPB SIN3A TARDBP LOC100499489 lnc-BMI1-2 MLLT10 BMI1 COMMD3 MIR1915 MIR1915HG HNRNPRP1 DNAJC1 LOC105376448
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HNRNPRP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HNRNPRP1 Gene

Latest Assembly
chr10:21,623,902-21,626,356
(GRCh38/hg38)
Size:
2,455 bases
Orientation:
Minus strand

Previous Assembly
chr10:21,912,831-21,915,285
(GRCh37/hg19 by Entrez Gene)
Size:
2,455 bases
Orientation:
Minus strand

chr10:21,913,521-21,915,215
(GRCh37/hg19 by Ensembl)
Size:
1,695 bases
Orientation:
Minus strand

Genomic View for HNRNPRP1 Gene

Genes around HNRNPRP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPRP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPRP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPRP1 Gene

Proteins for HNRNPRP1 Gene

Post-translational modifications for HNRNPRP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPRP1 Gene

Domains & Families for HNRNPRP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HNRNPRP1 Gene

Function for HNRNPRP1 Gene

Phenotypes From GWAS Catalog for HNRNPRP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPRP1 Gene

Localization for HNRNPRP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HNRNPRP1 Gene

Pathways & Interactions for HNRNPRP1 Gene

PathCards logo

SuperPathways for HNRNPRP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HNRNPRP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HNRNPRP1 Gene

Drugs & Compounds for HNRNPRP1 Gene

No Compound Related Data Available

Transcripts for HNRNPRP1 Gene

mRNA/cDNA for HNRNPRP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPRP1 Gene

No ASD Table

Relevant External Links for HNRNPRP1 Gene

GeneLoc Exon Structure for
HNRNPRP1

Expression for HNRNPRP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HNRNPRP1 Gene

genes like me logo Genes that share expression patterns with HNRNPRP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPRP1 Gene

Orthologs for HNRNPRP1 Gene

Evolution for HNRNPRP1 Gene

ENSEMBL:
Gene Tree for HNRNPRP1 (if available)
TreeFam:
Gene Tree for HNRNPRP1 (if available)
Alliance of Genome Resources:
Additional Orthologs for HNRNPRP1

No data available for Orthologs for HNRNPRP1 Gene

Paralogs for HNRNPRP1 Gene

No data available for Paralogs for HNRNPRP1 Gene

Variants for HNRNPRP1 Gene

Additional Variant Information for HNRNPRP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPRP1
Leiden Open Variation Database (LOVD)
HNRNPRP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HNRNPRP1 Gene

Disorders for HNRNPRP1 Gene

No disorders were found for HNRNPRP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HNRNPRP1 Gene

Publications for HNRNPRP1 Gene

No publications were found for HNRNPRP1 Gene.

Products for HNRNPRP1 Gene

Sources for HNRNPRP1 Gene