Aliases for HNRNPKP3 Gene

Aliases for HNRNPKP3 Gene

  • Heterogeneous Nuclear Ribonucleoprotein K Pseudogene 3 2 3 5

External Ids for HNRNPKP3 Gene

Summaries for HNRNPKP3 Gene

GeneCards Summary for HNRNPKP3 Gene

HNRNPKP3 (Heterogeneous Nuclear Ribonucleoprotein K Pseudogene 3) is a Pseudogene.

Additional gene information for HNRNPKP3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HNRNPKP3 Gene

Genomics for HNRNPKP3 Gene

GeneHancer (GH) Regulatory Elements for HNRNPKP3 Gene

Promoters and enhancers for HNRNPKP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J043268 Enhancer 0.4 Ensembl ENCODE 750.6 +0.4 367 2 POLR2A HNRNPKP3 lnc-ALX4-8 API5 TTC17 RF00994-179
GH11J043643 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 15.7 -375.1 -375108 2.2 SIN3A ZNF24 SP1 ZBTB40 SIX5 MLX SMARCE1 RBPJ POLR2A HDAC2 lnc-HSD17B12-1 ALKBH3 TTC17 ENSG00000246250 SEC14L1P1 HSD17B12 EXT2 ENSG00000254907 HNRNPKP3 ACCS
GH11J043278 Enhancer 0.3 Ensembl 0.4 -9.0 -9008 0.4 CTCF API5 PPIAP41 HNRNPKP3 lnc-ALX4-8
GH11J043145 Enhancer 0.6 FANTOM5 0.1 +123.5 123488 0.2 SP1 ETV6 CREM IKZF1 IKZF2 DPF2 RUNX3 JUNB NBN BATF piR-48965-020 piR-46002-092 lnc-ALX4-8 HNRNPKP3
GH11J043222 Enhancer 0.3 Ensembl 0.2 +46.9 46892 0.6 NFE2 API5 piR-33998-002 RF00994-179 HNRNPKP3 lnc-ALX4-8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HNRNPKP3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HNRNPKP3 Gene

Genomic Locations for HNRNPKP3 Gene
chr11:43,120,762-43,269,393
(GRCh38/hg38)
Size:
148,632 bases
Orientation:
Minus strand
chr11:43,142,312-43,290,943
(GRCh37/hg19)
Size:
148,632 bases
Orientation:
Minus strand

Genomic View for HNRNPKP3 Gene

Genes around HNRNPKP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPKP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPKP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPKP3 Gene

Proteins for HNRNPKP3 Gene

Post-translational modifications for HNRNPKP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPKP3 Gene

Domains & Families for HNRNPKP3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HNRNPKP3 Gene

Function for HNRNPKP3 Gene

Phenotypes From GWAS Catalog for HNRNPKP3 Gene

Phenotypes for HNRNPKP3 Gene

genes like me logo Genes that share phenotypes with HNRNPKP3: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPKP3 Gene

Localization for HNRNPKP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HNRNPKP3 Gene

Pathways & Interactions for HNRNPKP3 Gene

PathCards logo

SuperPathways for HNRNPKP3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HNRNPKP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HNRNPKP3 Gene

Drugs & Compounds for HNRNPKP3 Gene

No Compound Related Data Available

Transcripts for HNRNPKP3 Gene

mRNA/cDNA for HNRNPKP3 Gene

(1) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPKP3 Gene

No ASD Table

Relevant External Links for HNRNPKP3 Gene

GeneLoc Exon Structure for
HNRNPKP3
ECgene alternative splicing isoforms for
HNRNPKP3

Expression for HNRNPKP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HNRNPKP3 Gene

mRNA differential expression in normal tissues according to GTEx for HNRNPKP3 Gene

This gene is overexpressed in Brain - Amygdala (x5.2), Brain - Anterior cingulate cortex (BA24) (x5.2), Brain - Caudate (basal ganglia) (x4.6), and Brain - Nucleus accumbens (basal ganglia) (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of HNRNPKP3 Gene:

HNRNPKP3

SOURCE GeneReport for Unigene cluster for HNRNPKP3 Gene:

Hs.446761
genes like me logo Genes that share expression patterns with HNRNPKP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPKP3 Gene

Orthologs for HNRNPKP3 Gene

Evolution for HNRNPKP3 Gene

ENSEMBL:
Gene Tree for HNRNPKP3 (if available)
TreeFam:
Gene Tree for HNRNPKP3 (if available)

No data available for Orthologs for HNRNPKP3 Gene

Paralogs for HNRNPKP3 Gene

No data available for Paralogs for HNRNPKP3 Gene

Variants for HNRNPKP3 Gene

Sequence variations from dbSNP and Humsavar for HNRNPKP3 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000375417 -- 43,264,310(-) T/A intron_variant
rs1000421317 -- 43,263,666(-) T/C intron_variant
rs1000540946 -- 43,270,037(-) A/G/T upstream_transcript_variant
rs1000656845 -- 43,269,845(-) T/G upstream_transcript_variant
rs1000821893 -- 43,271,110(-) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for HNRNPKP3 Gene

Variant ID Type Subtype PubMed ID
esv3891972 CNV gain 25118596
nsv554119 CNV gain 21841781

Additional Variant Information for HNRNPKP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPKP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HNRNPKP3 Gene

Disorders for HNRNPKP3 Gene

Additional Disease Information for HNRNPKP3

No disorders were found for HNRNPKP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HNRNPKP3 Gene

Publications for HNRNPKP3 Gene

No publications were found for HNRNPKP3 Gene.

Products for HNRNPKP3 Gene

Sources for HNRNPKP3 Gene