Aliases for HNRNPCP4 Gene

Aliases for HNRNPCP4 Gene

  • Heterogeneous Nuclear Ribonucleoprotein C Pseudogene 4 2 3 5
  • Heterogeneous Nuclear Ribonucleoprotein C (C1/C2) Pseudogene 3
  • HNRNPCP4 5

External Ids for HNRNPCP4 Gene

Previous GeneCards Identifiers for HNRNPCP4 Gene

  • GC16P011337

Summaries for HNRNPCP4 Gene

GeneCards Summary for HNRNPCP4 Gene

HNRNPCP4 (Heterogeneous Nuclear Ribonucleoprotein C Pseudogene 4) is a Pseudogene.

Additional gene information for HNRNPCP4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HNRNPCP4 Gene

Genomics for HNRNPCP4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HNRNPCP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J011240 Enhancer 1 Ensembl ENCODE dbSUPER 250.7 -1.9 -1865 2 IRF2 ZFP91 HDAC2 STAT5A ZNF189 TFDP1 ZNF133 ZMYM3 HDAC1 ZNF366 HNRNPCP4 HSALNG0109583 RMI2 TNP2 ENSG00000212228 PRM3 PRM2 CLEC16A
GH16J011242 Enhancer 0.6 FANTOM5 dbSUPER 250.7 +0.5 461 0.1 SAP130 MLX GATAD2A KDM1A HNRNPCP4 LITAF LOC105371082 RMI2 CLEC16A
GH16J011243 Enhancer 0.5 Ensembl dbSUPER 250.7 +0.2 235 0.2 SAP130 KDM1A HNRNPCP4 RMI2 LOC105371082 CLEC16A
GH16J011913 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 60 +672.8 672803 4.9 ZSCAN16 CHD2 TBP SP1 MXD4 FEZF1 CEBPA SIX5 NR2C1 MNT GSPT1 LOC112268177 piR-37519 lnc-NPIPB2-4 RSL1D1-DT ENSG00000261560 HNRNPCP4 NPIPB2 SOCS1 RSL1D1
GH16J011639 Promoter/Enhancer 2.2 VISTA FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 54.1 +398.2 398192 3.3 CEBPA PLRG1 FOXA1 ZFP64 ZNF217 CTCF BRCA1 SIX4 BHLHE40 ZEB1 lnc-SNN-7 RSL1D1-DT HNRNPCP4 ENSG00000261560 LITAF COX6CP1 ZC3H7A TXNDC11 ENSG00000261216 NPIPB2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HNRNPCP4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HNRNPCP4 Gene

Latest Assembly
chr16:11,242,466-11,243,749
(GRCh38/hg38)
Size:
1,284 bases
Orientation:
Plus strand

Previous Assembly
chr16:11,336,323-11,337,606
(GRCh37/hg19 by Entrez Gene)
Size:
1,284 bases
Orientation:
Plus strand

chr16:11,336,510-11,337,409
(GRCh37/hg19 by Ensembl)
Size:
900 bases
Orientation:
Plus strand

Genomic View for HNRNPCP4 Gene

Genes around HNRNPCP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPCP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPCP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPCP4 Gene

Proteins for HNRNPCP4 Gene

Post-translational modifications for HNRNPCP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPCP4 Gene

Domains & Families for HNRNPCP4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HNRNPCP4 Gene

Function for HNRNPCP4 Gene

Phenotypes From GWAS Catalog for HNRNPCP4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPCP4 Gene

Localization for HNRNPCP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HNRNPCP4 Gene

Pathways & Interactions for HNRNPCP4 Gene

PathCards logo

SuperPathways for HNRNPCP4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HNRNPCP4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HNRNPCP4 Gene

Drugs & Compounds for HNRNPCP4 Gene

No Compound Related Data Available

Transcripts for HNRNPCP4 Gene

mRNA/cDNA for HNRNPCP4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPCP4 Gene

No ASD Table

Relevant External Links for HNRNPCP4 Gene

GeneLoc Exon Structure for
HNRNPCP4

Expression for HNRNPCP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HNRNPCP4 Gene

mRNA differential expression in normal tissues according to GTEx for HNRNPCP4 Gene

This gene is overexpressed in Pituitary (x5.3).
genes like me logo Genes that share expression patterns with HNRNPCP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPCP4 Gene

Orthologs for HNRNPCP4 Gene

Evolution for HNRNPCP4 Gene

ENSEMBL:
Gene Tree for HNRNPCP4 (if available)
TreeFam:
Gene Tree for HNRNPCP4 (if available)

No data available for Orthologs for HNRNPCP4 Gene

Paralogs for HNRNPCP4 Gene

No data available for Paralogs for HNRNPCP4 Gene

Variants for HNRNPCP4 Gene

Additional Variant Information for HNRNPCP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPCP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HNRNPCP4 Gene

Disorders for HNRNPCP4 Gene

No disorders were found for HNRNPCP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HNRNPCP4 Gene

Publications for HNRNPCP4 Gene

No publications were found for HNRNPCP4 Gene.

Products for HNRNPCP4 Gene

Sources for HNRNPCP4 Gene