HNRNPA3P1 Gene (Pseudogene)

Heterogeneous Nuclear Ribonucleoprotein A3 Pseudogene 1

GC10M043787
GIFtS:
15
This locus shares sequence similarity with heterogeneous nuclear ribonuclear proteins and represents an apparent transcribed pseudogene of the HNRPA3 gene, which maps to chromosome 2. [provided by RefSeq, Jul 2008] See more...

Aliases for HNRNPA3P1 Gene

Aliases for HNRNPA3P1 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A3 Pseudogene 1 2 3 5
  • D10S102 2 3
  • FBRNP 2 3
  • Heterogeneous Nuclear Ribonucleoprotein A3 2
  • HNRNPA3P1 5
  • HNRPA3P1 3
  • HNRPA3 3

External Ids for HNRNPA3P1 Gene

Previous HGNC Symbols for HNRNPA3P1 Gene

  • HNRPA3
  • HNRPA3P1

Previous GeneCards Identifiers for HNRNPA3P1 Gene

  • GC10M043602
  • GC10M044282

Summaries for HNRNPA3P1 Gene

Entrez Gene Summary for HNRNPA3P1 Gene

  • This locus shares sequence similarity with heterogeneous nuclear ribonuclear proteins and represents an apparent transcribed pseudogene of the HNRPA3 gene, which maps to chromosome 2. [provided by RefSeq, Jul 2008]

GeneCards Summary for HNRNPA3P1 Gene

HNRNPA3P1 (Heterogeneous Nuclear Ribonucleoprotein A3 Pseudogene 1) is a Pseudogene. Among its related pathways are mRNA Splicing - Major Pathway.

Additional gene information for HNRNPA3P1 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HNRNPA3P1 Gene

Genomics for HNRNPA3P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for HNRNPA3P1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HNRNPA3P1 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the HNRNPA3P1 gene promoter:
  • AML1a
  • AREB6
  • Evi-1
  • p53
  • POU2F1
  • POU2F1a
  • RP58
  • ZIC2

Genomic Locations for HNRNPA3P1 Gene

Latest Assembly
chr10:43,787,412-43,790,417
(GRCh38/hg38)
Size:
3,006 bases
Orientation:
Minus strand

Previous Assembly
chr10:44,282,860-44,285,865
(GRCh37/hg19 by Entrez Gene)
Size:
3,006 bases
Orientation:
Minus strand

chr10:44,282,860-44,285,865
(GRCh37/hg19 by Ensembl)
Size:
3,006 bases
Orientation:
Minus strand

Genomic View for HNRNPA3P1 Gene

Genes around HNRNPA3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPA3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPA3P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HNRNPA3P1 Gene

Proteins for HNRNPA3P1 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for HNRNPA3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA3P1 Gene

Domains & Families for HNRNPA3P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HNRNPA3P1 Gene

Function for HNRNPA3P1 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Phenotypes From GWAS Catalog for HNRNPA3P1 Gene

Phenotypes for HNRNPA3P1 Gene

GenomeRNAi human phenotypes for HNRNPA3P1:
genes like me logo Genes that share phenotypes with HNRNPA3P1: view

miRNA for HNRNPA3P1 Gene

miRTarBase miRNAs that target HNRNPA3P1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HNRNPA3P1 Gene

Localization for HNRNPA3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HNRNPA3P1 Gene

Pathways & Interactions for HNRNPA3P1 Gene

PathCards logo

SuperPathways for HNRNPA3P1 Gene

SuperPathway Contained pathways
1 mRNA Splicing - Major Pathway
mRNA Processing
.41
genes like me logo Genes that share pathways with HNRNPA3P1: view

Pathways by source for HNRNPA3P1 Gene

1 BioSystems pathway for HNRNPA3P1 Gene

Gene Ontology (GO) - Biological Process for HNRNPA3P1 Gene

None

No data available for Interacting Proteins and SIGNOR curated interactions for HNRNPA3P1 Gene

Drugs & Compounds for HNRNPA3P1 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for HNRNPA3P1 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

mRNA/cDNA for HNRNPA3P1 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA3P1 Gene

No ASD Table

Relevant External Links for HNRNPA3P1 Gene

GeneLoc Exon Structure for
HNRNPA3P1

Expression for HNRNPA3P1 Gene

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  1. Primer products for research
  2. Gene Expression Assays for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HNRNPA3P1 Gene

mRNA expression in normal human tissues for HNRNPA3P1 Gene
mRNA expression by GTEx for HNRNPA3P1 GenemRNA expression by BioGPS for HNRNPA3P1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for HNRNPA3P1

SOURCE GeneReport for Unigene cluster for HNRNPA3P1 Gene:

Hs.632956
genes like me logo Genes that share expression patterns with HNRNPA3P1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPA3P1 Gene

Orthologs for HNRNPA3P1 Gene

Evolution for HNRNPA3P1 Gene

ENSEMBL:
Gene Tree for HNRNPA3P1 (if available)
TreeFam:
Gene Tree for HNRNPA3P1 (if available)

No data available for Orthologs for HNRNPA3P1 Gene

Paralogs for HNRNPA3P1 Gene

No data available for Paralogs for HNRNPA3P1 Gene

Variants for HNRNPA3P1 Gene

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  1. SNP Genotyping and Copy Number Assays for research

Structural Variations from Database of Genomic Variants (DGV) for HNRNPA3P1 Gene

Variant ID Type Subtype PubMed ID
nsv947899 CNV duplication 23825009

Additional Variant Information for HNRNPA3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPA3P1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for HNRNPA3P1 Gene

Disorders for HNRNPA3P1 Gene

Additional Disease Information for HNRNPA3P1

Genetic Association Database
(GAD)
Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for HNRNPA3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HNRNPA3P1 Gene

Publications for HNRNPA3P1 Gene

  1. Identification and characterization of a cDNA, which is highly homologous to the ribonucleoprotein gene, from a locus (D10S102) closely linked to MEN2 (multiple endocrine neoplasia type 2). (PMID: 8101480) Takiguchi S … Nakamura Y (Cytogenetics and cell genetics 1993) 2 3
  2. Genome-wide association study link novel loci to endometriosis. (PMID: 23472165) Albertsen HM … Ward K (PloS one 2013) 3
  3. Large-scale association analysis identifies 13 new susceptibility loci for coronary artery disease. (PMID: 21378990) Schunkert H … Samani NJ (Nature genetics 2011) 41
  4. Network organization of the human autophagy system. (PMID: 20562859) Behrends C … Harper JW (Nature 2010) 3
  5. Deregulated expression of hnRNP A/B proteins in human non-small cell lung cancer: parallel assessment of protein and mRNA levels in paired tumour/non-tumour tissues. (PMID: 20716340) Boukakis G … Guialis A (BMC cancer 2010) 3

ExternalLinks

View latest publications for HNRNPA3P1 gene in Mastermind

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