Aliases for HNRNPA1P21 Gene

Aliases for HNRNPA1P21 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 21 2 3 5
  • HNRNPA1P21 5
  • HNRNPA1P 3

External Ids for HNRNPA1P21 Gene

Previous GeneCards Identifiers for HNRNPA1P21 Gene

  • GC03P039380
  • GC03P039383
  • GC03P039387
  • GC03P039390

Summaries for HNRNPA1P21 Gene

GeneCards Summary for HNRNPA1P21 Gene

HNRNPA1P21 (Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 21) is a Pseudogene.

Additional gene information for HNRNPA1P21 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HNRNPA1P21 Gene

Genomics for HNRNPA1P21 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HNRNPA1P21 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J039334 Enhancer 0.2 FANTOM5 600.7 -0.6 -579 0.2 HNRNPA1P21 lnc-CCR8-2 CCR8 RPSA SLC25A38 WDR48 ENSG00000287780
GH03J039361 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 19.5 +27.1 27092 1.6 SP1 GATAD2A FOXA1 RELA EED POLR2A EGR1 RUNX3 ZNF316 CBFB RPSA HNRNPA1P21 CCR8 SNORA6 CX3CR1 XIRP1 SLC25A38 WDR48 lnc-SLC25A38-3 piR-46256-023
GH03J039279 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE dbSUPER 10.2 -55.4 -55414 4.6 ZNF584 CTCF SPI1 CX3CR1 XIRP1 GORASP1 TTC21A CCR8 HNRNPA1P21 RPSA RNU6-1227P ENSG00000287958
GH03J039266 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 10.8 -66.6 -66624 3.4 POLR2A YY1 ZNF766 HMBOX1 RELB RUNX3 GATAD2B NR2C2 ZBTB11 FOSL1 GORASP1 CSRNP1 ACVR2B-AS1 XIRP1 CCR8 HNRNPA1P21 TTC21A RPSA WDR48 SLC25A38
GH03J039294 Enhancer 1 Ensembl ENCODE 11.8 -39.9 -39915 2 SP1 STAT3 JUND RELA TCF12 IKZF2 RCOR1 TRIM22 YY1 PKNOX1 RPSA CCR8 HNRNPA1P21 XIRP1 ADAD1P1 CX3CR1 ENSG00000287780
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HNRNPA1P21 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HNRNPA1P21 Gene

Genomic Locations for HNRNPA1P21 Gene
chr3:39,334,915-39,336,077
(GRCh38/hg38)
Size:
1,163 bases
Orientation:
Plus strand
chr3:39,376,470-39,377,430
(GRCh37/hg19)
Size:
961 bases
Orientation:
Plus strand

Genomic View for HNRNPA1P21 Gene

Genes around HNRNPA1P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPA1P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPA1P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPA1P21 Gene

Proteins for HNRNPA1P21 Gene

Post-translational modifications for HNRNPA1P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA1P21 Gene

Domains & Families for HNRNPA1P21 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HNRNPA1P21 Gene

Function for HNRNPA1P21 Gene

Phenotypes From GWAS Catalog for HNRNPA1P21 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPA1P21 Gene

Localization for HNRNPA1P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HNRNPA1P21 Gene

Pathways & Interactions for HNRNPA1P21 Gene

PathCards logo

SuperPathways for HNRNPA1P21 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HNRNPA1P21 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HNRNPA1P21 Gene

Drugs & Compounds for HNRNPA1P21 Gene

No Compound Related Data Available

Transcripts for HNRNPA1P21 Gene

mRNA/cDNA for HNRNPA1P21 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA1P21 Gene

No ASD Table

Relevant External Links for HNRNPA1P21 Gene

GeneLoc Exon Structure for
HNRNPA1P21

Expression for HNRNPA1P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HNRNPA1P21 Gene

mRNA differential expression in normal tissues according to GTEx for HNRNPA1P21 Gene

This gene is overexpressed in Whole Blood (x5.9).
genes like me logo Genes that share expression patterns with HNRNPA1P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPA1P21 Gene

Orthologs for HNRNPA1P21 Gene

Evolution for HNRNPA1P21 Gene

ENSEMBL:
Gene Tree for HNRNPA1P21 (if available)
TreeFam:
Gene Tree for HNRNPA1P21 (if available)

No data available for Orthologs for HNRNPA1P21 Gene

Paralogs for HNRNPA1P21 Gene

No data available for Paralogs for HNRNPA1P21 Gene

Variants for HNRNPA1P21 Gene

Additional Variant Information for HNRNPA1P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPA1P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HNRNPA1P21 Gene

Disorders for HNRNPA1P21 Gene

No disorders were found for HNRNPA1P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HNRNPA1P21 Gene

Publications for HNRNPA1P21 Gene

  1. Genomic organization and evolution of the CX3CR1/CCR8 chemokine receptor locus. (PMID: 12551893) DeVries ME … Kelvin DJ (The Journal of biological chemistry 2003) 3

Products for HNRNPA1P21 Gene

Sources for HNRNPA1P21 Gene