Aliases for HNRNPA1P16 Gene

Aliases for HNRNPA1P16 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 16 2 3 5
  • Heterogeneous Nuclear Ribonucleoprotein A1pseudogene 3

External Ids for HNRNPA1P16 Gene

Previous GeneCards Identifiers for HNRNPA1P16 Gene

  • GC17P002210

Summaries for HNRNPA1P16 Gene

GeneCards Summary for HNRNPA1P16 Gene

HNRNPA1P16 (Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 16) is a Pseudogene.

Additional gene information for HNRNPA1P16 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HNRNPA1P16 Gene

Genomics for HNRNPA1P16 Gene

GeneHancer (GH) Regulatory Elements for HNRNPA1P16 Gene

Promoters and enhancers for HNRNPA1P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J002308 Enhancer 0.3 Ensembl 750.6 +0.6 640 0.4 SCRT2 OSR2 HNRNPA1P16 lnc-SMG6-1 piR-59942 SRR
GH17J002389 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 33.7 +92.3 92251 18.6 ZNF785 SIN3A ZNF24 ZBTB40 SP1 CTCF ZBTB6 MLX SMARCE1 POLR2A MNT RF00457 PRPF8 SMYD4 METTL16 WDR81 HNRNPA1P16 SMG6 RN7SL608P ENSG00000263345
GH17J002261 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 47.1 -41.7 -41671 7.3 SP1 LCORL ETV6 RELA NFIB BCL6B MLLT1 SP7 POLR2A ZNF687 SMG6 SRR HNRNPA1P16 TSR1 DPH1 ENSG00000262050 LOC101927839 HIC1 OVCA2 ENSG00000236457
GH17J001515 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 29.5 -789.5 -789505 4.5 PPP1R10 ZNF785 SIN3A SP1 ZBTB40 CTCF MLX POLR2A HDAC2 ATF1 INPP5K PITPNA-AS1 piR-37502 PRPF8 SMG6 GEMIN4 SMYD4 WDR81 METTL16 HNRNPA1P16
GH17J002040 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 29.6 -263.8 -263815 4.1 PPP1R10 SIN3A SP1 ZBTB40 CTCF SIX5 ZBTB6 SMARCE1 RBPJ POLR2A ENSG00000262533 ENSG00000287553 OVCA2 PRPF8 WDR81 SMG6 SMYD4 HNRNPA1P16 MNT MYO1C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HNRNPA1P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HNRNPA1P16 Gene

Genomic Locations for HNRNPA1P16 Gene
chr17:2,306,761-2,308,048
(GRCh38/hg38)
Size:
1,288 bases
Orientation:
Plus strand
chr17:2,210,049-2,211,340
(GRCh37/hg19)
Size:
1,292 bases
Orientation:
Plus strand

Genomic View for HNRNPA1P16 Gene

Genes around HNRNPA1P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPA1P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPA1P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPA1P16 Gene

Proteins for HNRNPA1P16 Gene

Post-translational modifications for HNRNPA1P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA1P16 Gene

Domains & Families for HNRNPA1P16 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HNRNPA1P16 Gene

Function for HNRNPA1P16 Gene

Phenotypes From GWAS Catalog for HNRNPA1P16 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPA1P16 Gene

Localization for HNRNPA1P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HNRNPA1P16 Gene

Pathways & Interactions for HNRNPA1P16 Gene

PathCards logo

SuperPathways for HNRNPA1P16 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HNRNPA1P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HNRNPA1P16 Gene

Drugs & Compounds for HNRNPA1P16 Gene

No Compound Related Data Available

Transcripts for HNRNPA1P16 Gene

mRNA/cDNA for HNRNPA1P16 Gene

(88) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA1P16 Gene

No ASD Table

Relevant External Links for HNRNPA1P16 Gene

GeneLoc Exon Structure for
HNRNPA1P16
ECgene alternative splicing isoforms for
HNRNPA1P16

Expression for HNRNPA1P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HNRNPA1P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of HNRNPA1P16 Gene:

HNRNPA1P16
genes like me logo Genes that share expression patterns with HNRNPA1P16: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPA1P16 Gene

Orthologs for HNRNPA1P16 Gene

Evolution for HNRNPA1P16 Gene

ENSEMBL:
Gene Tree for HNRNPA1P16 (if available)
TreeFam:
Gene Tree for HNRNPA1P16 (if available)

No data available for Orthologs for HNRNPA1P16 Gene

Paralogs for HNRNPA1P16 Gene

No data available for Paralogs for HNRNPA1P16 Gene

Variants for HNRNPA1P16 Gene

Additional Variant Information for HNRNPA1P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPA1P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HNRNPA1P16 Gene

Disorders for HNRNPA1P16 Gene

No disorders were found for HNRNPA1P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HNRNPA1P16 Gene

Publications for HNRNPA1P16 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for HNRNPA1P16 Gene

Products for HNRNPA1P16 Gene

Sources for HNRNPA1P16 Gene