Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HMGN2P5 Gene

Aliases for HMGN2P5 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 5 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2-Like 5 2 3
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 5 2
  • HMGN2L5 3

External Ids for HMGN2P5 Gene

Previous HGNC Symbols for HMGN2P5 Gene

  • HMGN2L5

Previous GeneCards Identifiers for HMGN2P5 Gene

  • GC15P027818
  • GC15P027821
  • GC15P030024

Summaries for HMGN2P5 Gene

GeneCards Summary for HMGN2P5 Gene

HMGN2P5 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 5) is a Pseudogene.

Additional gene information for HMGN2P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P5 Gene

Genomics for HMGN2P5 Gene

GeneHancer (GH) Regulatory Elements for HMGN2P5 Gene

Promoters and enhancers for HMGN2P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I029730 Enhancer 0.3 FANTOM5 550.8 -0.1 -148 0.3 ENSG00000259644 GC15P029731 HMGN2P5 FAM189A1 TJP1
GH15I030624 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 14.1 +895.3 895289 3.8 HDGF PKNOX1 ATF1 ARNT ARID4B SIN3A FEZF1 DMAP1 NCOA2 POLR2B ARHGAP11B ENSG00000247728 DNM1P50 GOLGA8Q HMGN2P5 ENSG00000260382 ULK4P3 LOC100288637
GH15I029819 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 13 +91.1 91051 4.2 PKNOX1 CLOCK FOXA2 ARID4B NEUROD1 SIN3A YY1 POLR2B FOS SP3 ENSG00000259523 TJP1 HMGN2P5 ENSG00000215302 ENSG00000270055 GC15P029731
GH15I030173 Enhancer 0.9 ENCODE 15.8 +442.9 442881 0.2 ZSCAN4 INSM2 KLF17 ZNF76 GLI4 ZNF2 ZNF155 GLIS2 KLF7 ZNF391 ENSG00000247728 ENSG00000215302 ENSG00000270016 GOLGA8R FAN1 GOLGA8Q HMGN2P5 ENSG00000270055 ENSG00000260693 TJP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN2P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN2P5 Gene

Genomic Locations for HMGN2P5 Gene
chr15:29,730,612-29,731,806
(GRCh38/hg38)
Size:
1,195 bases
Orientation:
Plus strand
chr15:30,022,816-30,024,010
(GRCh37/hg19)

Genomic View for HMGN2P5 Gene

Genes around HMGN2P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P5 Gene

Proteins for HMGN2P5 Gene

Post-translational modifications for HMGN2P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P5 Gene

Domains & Families for HMGN2P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P5 Gene

Function for HMGN2P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P5 Gene

Localization for HMGN2P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN2P5 Gene

Pathways & Interactions for HMGN2P5 Gene

SuperPathways for HMGN2P5 Gene

No Data Available

Interacting Proteins for HMGN2P5 Gene

Gene Ontology (GO) - Biological Process for HMGN2P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P5 Gene

Drugs & Compounds for HMGN2P5 Gene

No Compound Related Data Available

Transcripts for HMGN2P5 Gene

mRNA/cDNA for HMGN2P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P5 Gene

No ASD Table

Relevant External Links for HMGN2P5 Gene

GeneLoc Exon Structure for
HMGN2P5
ECgene alternative splicing isoforms for
HMGN2P5

Expression for HMGN2P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P5 Gene:

HMGN2P5
genes like me logo Genes that share expression patterns with HMGN2P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P5 Gene

Orthologs for HMGN2P5 Gene

Evolution for HMGN2P5 Gene

ENSEMBL:
Gene Tree for HMGN2P5 (if available)
TreeFam:
Gene Tree for HMGN2P5 (if available)

No data available for Orthologs for HMGN2P5 Gene

Paralogs for HMGN2P5 Gene

No data available for Paralogs for HMGN2P5 Gene

Variants for HMGN2P5 Gene

Additional Variant Information for HMGN2P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P5 Gene

Disorders for HMGN2P5 Gene

No disorders were found for HMGN2P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P5 Gene

Publications for HMGN2P5 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGN2P5 Gene

Sources for HMGN2P5 Gene

Content
Loading form....