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Aliases for HMGN2P30 Gene

Aliases for HMGN2P30 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 30 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 30 2

External Ids for HMGN2P30 Gene

Summaries for HMGN2P30 Gene

GeneCards Summary for HMGN2P30 Gene

HMGN2P30 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 30) is a Pseudogene.

Additional gene information for HMGN2P30 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P30 Gene

Genomics for HMGN2P30 Gene

GeneHancer (GH) Regulatory Elements for HMGN2P30 Gene

Promoters and enhancers for HMGN2P30 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I042107 Enhancer 1 Ensembl ENCODE 0.4 -5.5 -5531 1.1 INSM2 KLF17 MZF1 FEZF1 ZNF2 ZNF121 ZNF213 ZSCAN5C KLF7 ZNF391 HMGN2P30 GC07P042012 GLI3
GH07I042095 Enhancer 0.9 Ensembl ENCODE 0.4 -15.6 -15631 3.3 CTCF ZNF211 JUN KLF17 ZIC2 GATA3 ZBTB48 POLR2A ZSCAN5C FOS GLI3 HMGN2P30 GC07P042012
GH07I042105 Enhancer 0.6 FANTOM5 ENCODE 0.4 -7.1 -7053 1 SCRT2 PRDM1 ZNF18 HMGN2P30 GC07P042012 GLI3
GH07I042090 Enhancer 0.8 ENCODE 0.3 -21.5 -21476 1.7 FOXA2 INSM2 MZF1 FEZF1 ZNF2 RARA ZNF121 ZNF213 KLF7 OVOL3 HMGN2P30 GC07P042012 GLI3
GH07I042067 Enhancer 0.7 ENCODE 0.3 -43.8 -43838 3 ESRRA PKNOX1 JUN MAX CEBPG BRCA1 ZBTB40 RFX5 CTBP1 GATA3 GLI3 HMGN2P30 GC07P042012
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN2P30 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN2P30 Gene

Genomic Locations for HMGN2P30 Gene
chr7:42,113,251-42,114,451
(GRCh38/hg38)
Size:
1,201 bases
Orientation:
Plus strand
chr7:42,152,850-42,154,050
(GRCh37/hg19)

Genomic View for HMGN2P30 Gene

Genes around HMGN2P30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P30 Gene

Proteins for HMGN2P30 Gene

Post-translational modifications for HMGN2P30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P30 Gene

Domains & Families for HMGN2P30 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P30 Gene

Function for HMGN2P30 Gene

Phenotypes From GWAS Catalog for HMGN2P30 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P30 Gene

Localization for HMGN2P30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN2P30 Gene

Pathways & Interactions for HMGN2P30 Gene

SuperPathways for HMGN2P30 Gene

No Data Available

Interacting Proteins for HMGN2P30 Gene

Gene Ontology (GO) - Biological Process for HMGN2P30 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P30 Gene

Drugs & Compounds for HMGN2P30 Gene

No Compound Related Data Available

Transcripts for HMGN2P30 Gene

mRNA/cDNA for HMGN2P30 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P30 Gene

No ASD Table

Relevant External Links for HMGN2P30 Gene

GeneLoc Exon Structure for
HMGN2P30
ECgene alternative splicing isoforms for
HMGN2P30

Expression for HMGN2P30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P30 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P30 Gene:

HMGN2P30
genes like me logo Genes that share expression patterns with HMGN2P30: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P30 Gene

Orthologs for HMGN2P30 Gene

Evolution for HMGN2P30 Gene

ENSEMBL:
Gene Tree for HMGN2P30 (if available)
TreeFam:
Gene Tree for HMGN2P30 (if available)

No data available for Orthologs for HMGN2P30 Gene

Paralogs for HMGN2P30 Gene

No data available for Paralogs for HMGN2P30 Gene

Variants for HMGN2P30 Gene

Additional Variant Information for HMGN2P30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P30 Gene

Disorders for HMGN2P30 Gene

No disorders were found for HMGN2P30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P30 Gene

Publications for HMGN2P30 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for HMGN2P30 Gene

Sources for HMGN2P30 Gene

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