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Aliases for HMGN2P20 Gene

Aliases for HMGN2P20 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 20 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 20 2

External Ids for HMGN2P20 Gene

Previous GeneCards Identifiers for HMGN2P20 Gene

  • GC00U931599
  • GC02P024556

Summaries for HMGN2P20 Gene

GeneCards Summary for HMGN2P20 Gene

HMGN2P20 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 20) is a Pseudogene.

Additional gene information for HMGN2P20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P20 Gene

Genomics for HMGN2P20 Gene

GeneHancer (GH) Regulatory Elements for HMGN2P20 Gene

Promoters and enhancers for HMGN2P20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I024328 Enhancer 1.1 Ensembl ENCODE dbSUPER 550.8 +0.0 48 3.9 HDGF MEIS2 PKNOX1 RB1 EBF1 BATF IRF4 ATF7 IKZF2 RUNX3 HMGN2P20 ITSN2 ENSG00000251805 FAM228A RPL36AP13 GC02P023754
GH02I024332 Enhancer 1 Ensembl ENCODE dbSUPER 0.8 +3.6 3561 1.9 PKNOX1 FOXA2 RXRA TAL1 MAX CBFA2T3 ELF1 YY1 ZNF217 JUND RPL36AP13 ITSN2 TP53I3 FAM228A HMGN2P20 GC02P023754
GH02I024315 Enhancer 0.9 ENCODE dbSUPER 0.4 -14.6 -14627 1 PKNOX1 BACH1 EBF1 BMI1 BATF ZSCAN5C ATF7 ETV6 BCLAF1 IKZF2 ITSN2 ENSG00000251805 ENSG00000242628 HMGN2P20 PIR31330 GC02M024302 GC02P023754
GH02I024329 Enhancer 0.4 Ensembl dbSUPER 0.8 -2.2 -2206 0.2 HMGN2P20 GC02M024302 PIR31330 ITSN2 GC02P023754
GH02I024303 Enhancer 0.9 Ensembl ENCODE 0.3 -25.8 -25787 1.8 FOXA2 MAX CEBPG RAD21 RARA YY1 GATA3 FOS RXRA BHLHE40 FAM228A ENSG00000251805 ITSN2 ENSG00000242628 GC02M024302 PIR31330 HMGN2P20 GC02P023754
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN2P20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN2P20 Gene

Genomic Locations for HMGN2P20 Gene
chr2:24,330,307-24,332,356
(GRCh38/hg38)
Size:
2,050 bases
Orientation:
Plus strand
chr2:24,553,176-24,555,225
(GRCh37/hg19)

Genomic View for HMGN2P20 Gene

Genes around HMGN2P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P20 Gene

Proteins for HMGN2P20 Gene

Post-translational modifications for HMGN2P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P20 Gene

Domains & Families for HMGN2P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P20 Gene

Function for HMGN2P20 Gene

Phenotypes for HMGN2P20 Gene

GenomeRNAi human phenotypes for HMGN2P20:
genes like me logo Genes that share phenotypes with HMGN2P20: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P20 Gene

Localization for HMGN2P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN2P20 Gene

Pathways & Interactions for HMGN2P20 Gene

SuperPathways for HMGN2P20 Gene

No Data Available

Interacting Proteins for HMGN2P20 Gene

Gene Ontology (GO) - Biological Process for HMGN2P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P20 Gene

Drugs & Compounds for HMGN2P20 Gene

No Compound Related Data Available

Transcripts for HMGN2P20 Gene

mRNA/cDNA for HMGN2P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P20 Gene

No ASD Table

Relevant External Links for HMGN2P20 Gene

GeneLoc Exon Structure for
HMGN2P20
ECgene alternative splicing isoforms for
HMGN2P20

Expression for HMGN2P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P20 Gene:

HMGN2P20
genes like me logo Genes that share expression patterns with HMGN2P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P20 Gene

Orthologs for HMGN2P20 Gene

Evolution for HMGN2P20 Gene

ENSEMBL:
Gene Tree for HMGN2P20 (if available)
TreeFam:
Gene Tree for HMGN2P20 (if available)

No data available for Orthologs for HMGN2P20 Gene

Paralogs for HMGN2P20 Gene

No data available for Paralogs for HMGN2P20 Gene

Variants for HMGN2P20 Gene

Additional Variant Information for HMGN2P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P20 Gene

Disorders for HMGN2P20 Gene

No disorders were found for HMGN2P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P20 Gene

Publications for HMGN2P20 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGN2P20 Gene

Sources for HMGN2P20 Gene

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