Aliases for HMGN2P13 Gene

Aliases for HMGN2P13 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 13 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 13 2

External Ids for HMGN2P13 Gene

Previous GeneCards Identifiers for HMGN2P13 Gene

  • GC03P152787

Summaries for HMGN2P13 Gene

GeneCards Summary for HMGN2P13 Gene

HMGN2P13 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 13) is a Pseudogene.

Additional gene information for HMGN2P13 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HMGN2P13 Gene

Genomics for HMGN2P13 Gene

GeneHancer (GH) Regulatory Elements for HMGN2P13 Gene

Promoters and enhancers for HMGN2P13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J153070 Enhancer 0.7 Ensembl 0.7 +2.1 2131 5 ZNF316 ZNF384 MAFF IRF1 MAFK ZNF592 PBX2 NFE2 FOSL1 JUND piR-49463-013 HMGN2P13 lnc-RAP2B-2 lnc-DHX36-7
GH03J153050 Enhancer 1.1 Ensembl ENCODE 0.4 -15.2 -15208 2.5 ZNF217 TCF12 JUND FOS POLR2A AFF1 NR3C1 MYC EP300 CTBP1 piR-32285-066 HMGN2P13 lnc-DHX36-7
GH03J153057 Enhancer 0.8 Ensembl ENCODE 0.4 -8.8 -8768 2.4 NFIC FOS CEBPB ZNF592 FOSL1 FOXA1 NR2F1 ZNF507 SMARCE1 ATF3 HMGN2P13 piR-32285-066 lnc-DHX36-7
GH03J153061 Enhancer 0.3 Ensembl 0.4 -5.7 -5668 0.6 CEBPB ZNF592 HMGN2P13 piR-32285-066 lnc-DHX36-7
GH03J153060 Enhancer 0.3 Ensembl 0.4 -6.3 -6268 0.2 ZNF592 HNRNPK HMGN2P13 piR-32285-066 lnc-DHX36-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HMGN2P13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN2P13 Gene

Genomic Locations for HMGN2P13 Gene
chr3:153,067,169-153,068,361
(GRCh38/hg38)
Size:
1,193 bases
Orientation:
Plus strand
chr3:152,784,944-152,786,164
(GRCh37/hg19)
Size:
1,221 bases
Orientation:
Plus strand

Genomic View for HMGN2P13 Gene

Genes around HMGN2P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P13 Gene

Proteins for HMGN2P13 Gene

Post-translational modifications for HMGN2P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P13 Gene

Domains & Families for HMGN2P13 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HMGN2P13 Gene

Function for HMGN2P13 Gene

Phenotypes From GWAS Catalog for HMGN2P13 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P13 Gene

Localization for HMGN2P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN2P13 Gene

Pathways & Interactions for HMGN2P13 Gene

PathCards logo

SuperPathways for HMGN2P13 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for HMGN2P13 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HMGN2P13 Gene

Drugs & Compounds for HMGN2P13 Gene

No Compound Related Data Available

Transcripts for HMGN2P13 Gene

mRNA/cDNA for HMGN2P13 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P13 Gene

No ASD Table

Relevant External Links for HMGN2P13 Gene

GeneLoc Exon Structure for
HMGN2P13

Expression for HMGN2P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGN2P13 Gene

mRNA differential expression in normal tissues according to GTEx for HMGN2P13 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x31.4), Colon - Sigmoid (x5.2), Brain - Caudate (basal ganglia) (x4.8), and Skin - Sun Exposed (Lower leg) (x4.6).
genes like me logo Genes that share expression patterns with HMGN2P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P13 Gene

Orthologs for HMGN2P13 Gene

Evolution for HMGN2P13 Gene

ENSEMBL:
Gene Tree for HMGN2P13 (if available)
TreeFam:
Gene Tree for HMGN2P13 (if available)

No data available for Orthologs for HMGN2P13 Gene

Paralogs for HMGN2P13 Gene

No data available for Paralogs for HMGN2P13 Gene

Variants for HMGN2P13 Gene

Additional Variant Information for HMGN2P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P13 Gene

Disorders for HMGN2P13 Gene

No disorders were found for HMGN2P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P13 Gene

Publications for HMGN2P13 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 54

No data available for Mastermind for HMGN2P13 Gene

Products for HMGN2P13 Gene

Sources for HMGN2P13 Gene