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Aliases for HMGN1P38 Gene

Aliases for HMGN1P38 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 38 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 38 2

External Ids for HMGN1P38 Gene

Previous GeneCards Identifiers for HMGN1P38 Gene

  • GC15P093260
  • GC15P093265
  • GC15P093268
  • GC15P093271
  • GC15P093479
  • GC15P093921
  • GC15P094237
  • GC15P094582

Summaries for HMGN1P38 Gene

GeneCards Summary for HMGN1P38 Gene

HMGN1P38 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 38) is a Pseudogene.

Additional gene information for HMGN1P38 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P38 Gene

Genomics for HMGN1P38 Gene

GeneHancer (GH) Regulatory Elements for HMGN1P38 Gene

Promoters and enhancers for HMGN1P38 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I092711 Enhancer 0.3 ENCODE 550.8 -0.1 -76 0.1 EZH2 GC15P095837 HMGN1P38 FAM174B ENSG00000272298 GC15M096533 PIR42313
GH15I092652 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 15.1 -57.5 -57545 4.2 HDGF CLOCK SMAD1 NEUROD1 SIN3A GLIS2 ELK1 ZNF143 FOS ZNF592 FAM174B CHD2 HMGN1P38 LOC105370975 PIR42313 GC15M096533
GH15I092898 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 9.7 +197.5 197475 20.4 MLX FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC PPARGC1A CHD2 ASB9P1 FAM174B HMGN1P38 MIR3175 GC15P095754 ENSG00000279765 LINC01578 LOC105370979
GH15I092816 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +108.5 108492 6.9 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ARNT NEUROD1 SIN3A FEZF1 DMAP1 ENSG00000275175 CHD2 ASB9P1 ENSG00000260361 HMGN1P38 ENSG00000258922 RGMA ST8SIA2 GC15P095996
GH15I092800 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +95.5 95468 14.1 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ENSG00000258922 ENSG00000274215 CHD2 ASB9P1 ENSG00000260361 HMGN1P38 FAM174B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN1P38 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN1P38 Gene

Genomic Locations for HMGN1P38 Gene
1,214 bases
Plus strand

Genomic View for HMGN1P38 Gene

Genes around HMGN1P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P38 Gene

Proteins for HMGN1P38 Gene

Post-translational modifications for HMGN1P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P38 Gene

Domains & Families for HMGN1P38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P38 Gene

Function for HMGN1P38 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P38 Gene

Localization for HMGN1P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P38 Gene

Pathways & Interactions for HMGN1P38 Gene

SuperPathways for HMGN1P38 Gene

No Data Available

Interacting Proteins for HMGN1P38 Gene

Gene Ontology (GO) - Biological Process for HMGN1P38 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGN1P38 Gene

Drugs & Compounds for HMGN1P38 Gene

No Compound Related Data Available

Transcripts for HMGN1P38 Gene

mRNA/cDNA for HMGN1P38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P38 Gene

No ASD Table

Relevant External Links for HMGN1P38 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGN1P38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P38 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P38 Gene:

genes like me logo Genes that share expression patterns with HMGN1P38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P38 Gene

Orthologs for HMGN1P38 Gene

Evolution for HMGN1P38 Gene

Gene Tree for HMGN1P38 (if available)
Gene Tree for HMGN1P38 (if available)

No data available for Orthologs for HMGN1P38 Gene

Paralogs for HMGN1P38 Gene

No data available for Paralogs for HMGN1P38 Gene

Variants for HMGN1P38 Gene

Additional Variant Information for HMGN1P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P38 Gene

Disorders for HMGN1P38 Gene

No disorders were found for HMGN1P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P38 Gene

Publications for HMGN1P38 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGN1P38 Gene

Sources for HMGN1P38 Gene

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