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Aliases for HMGN1P33 Gene

Subcategory (RNA class) for HMGN1P33 Gene

antisense

Aliases for HMGN1P33 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 33 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 33 2

External Ids for HMGN1P33 Gene

ORGUL Members for HMGN1P33 Gene

Previous GeneCards Identifiers for HMGN1P33 Gene

  • GC00U931337
  • GC0XM009834

Summaries for HMGN1P33 Gene

GeneCards Summary for HMGN1P33 Gene

HMGN1P33 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 33) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for HMGN1P33 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P33 Gene

Genomics for HMGN1P33 Gene

GeneHancer (GH) Regulatory Elements for HMGN1P33 Gene

Promoters and enhancers for HMGN1P33 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ009865 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 -1.4 -1354 2.5 RELA TCF7L2 CEBPB CHD2 JUN RCOR1 JUND EP300 STAT3 USF2 HMGN1P33 SHROOM2 GC0XM009986 ENSG00000206844
GH0XJ009863 Enhancer 0.7 Ensembl ENCODE 600.7 +1.4 1442 1.4 CBFA2T2 PKNOX1 CEBPB TCF12 TAL1 CBFA2T3 HMGN1P33 EIF5P1 SHROOM2
GH0XJ009844 Enhancer 0.8 Ensembl ENCODE 0.4 +18.9 18949 3.2 CEBPG CEBPA CEBPB FOS EP300 SAP130 NFE2L2 BCL6 SMAD4 TEAD3 SHROOM2 GPR143 HMGN1P33 EIF5P1
GH0XJ009829 Enhancer 0.9 Ensembl ENCODE 0.3 +35.8 35764 1.6 RELA CREM FOSL2 IKZF1 BACH1 IKZF2 TRIM22 CEBPB CBFB JUN SHROOM2 GPR143 EIF5P1 HMGN1P33
GH0XJ009852 Enhancer 0.6 Ensembl ENCODE 0.4 +12.0 12042 3 ZKSCAN1 GATA3 JUND SHROOM2 GPR143 HMGN1P33 EIF5P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HMGN1P33 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN1P33 Gene

Genomic Locations for HMGN1P33 Gene
chrX:9,865,093-9,865,543
(GRCh38/hg38)
Size:
451 bases
Orientation:
Minus strand
chrX:9,833,133-9,833,583
(GRCh37/hg19)
Size:
451 bases
Orientation:
Minus strand

Genomic View for HMGN1P33 Gene

Genes around HMGN1P33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P33 Gene

Proteins for HMGN1P33 Gene

Post-translational modifications for HMGN1P33 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P33 Gene

Domains & Families for HMGN1P33 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P33 Gene

Function for HMGN1P33 Gene

Phenotypes From GWAS Catalog for HMGN1P33 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P33 Gene

Localization for HMGN1P33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P33 Gene

Pathways & Interactions for HMGN1P33 Gene

PathCards logo

SuperPathways for HMGN1P33 Gene

No Data Available

Interacting Proteins for HMGN1P33 Gene

Gene Ontology (GO) - Biological Process for HMGN1P33 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P33 Gene

Drugs & Compounds for HMGN1P33 Gene

No Compound Related Data Available

Transcripts for HMGN1P33 Gene

mRNA/cDNA for HMGN1P33 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P33 Gene

No ASD Table

Relevant External Links for HMGN1P33 Gene

GeneLoc Exon Structure for
HMGN1P33
ECgene alternative splicing isoforms for
HMGN1P33

Expression for HMGN1P33 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P33 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P33 Gene:

HMGN1P33
genes like me logo Genes that share expression patterns with HMGN1P33: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P33 Gene

Orthologs for HMGN1P33 Gene

Evolution for HMGN1P33 Gene

ENSEMBL:
Gene Tree for HMGN1P33 (if available)
TreeFam:
Gene Tree for HMGN1P33 (if available)

No data available for Orthologs for HMGN1P33 Gene

Paralogs for HMGN1P33 Gene

No data available for Paralogs for HMGN1P33 Gene

Variants for HMGN1P33 Gene

Additional Variant Information for HMGN1P33 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P33 Gene

Disorders for HMGN1P33 Gene

No disorders were found for HMGN1P33 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P33 Gene

Publications for HMGN1P33 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

No data available for External Links for HMGN1P33 Gene

Products for HMGN1P33 Gene

Sources for HMGN1P33 Gene

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