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Aliases for HMGN1P25 Gene

Aliases for HMGN1P25 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 25 2 3
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 25 2
  • AL845552.1 5

External Ids for HMGN1P25 Gene

Previous GeneCards Identifiers for HMGN1P25 Gene

  • GC14P081128
  • GC14P101017
  • GC14P101026
  • GC14P101036
  • GC14P101063
  • GC14P101101
  • GC14P101144
  • GC14P101188
  • GC14P101177
  • GC14P101358
  • GC14P102041
  • GC14P102291
  • GC14P102467
  • GC14P102638
  • GC14P102806

Summaries for HMGN1P25 Gene

GeneCards Summary for HMGN1P25 Gene

HMGN1P25 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 25) is a Pseudogene.

Additional gene information for HMGN1P25 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P25 Gene

Genomics for HMGN1P25 Gene

GeneHancer (GH) Regulatory Elements for HMGN1P25 Gene

Promoters and enhancers for HMGN1P25 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I100475 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.8 -4.1 -4134 3.4 PKNOX1 FOXA2 MLX ARNT ARID4B FEZF1 ZNF2 FOS SP5 SMARCB1 BEGAIN MEG3 DLK1 HMGN1P25 GC14M100431 LOC105370664 WDR25
GH14I100435 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -41.5 -41491 7.7 HDGF PKNOX1 FOXA2 SIN3A FEZF1 ZNF2 ZBTB7B BRCA1 ZNF48 YY1 BEGAIN WARS WDR25 LOC105370664 HMGN1P25 GC14M100431
GH14I100470 Enhancer 1.1 ENCODE dbSUPER 0.4 -8.4 -8435 3.3 PKNOX1 INSM2 SIN3A FEZF1 GLI4 ZNF2 RAD21 ZNF335 GLIS2 ZNF366 CCNK BEGAIN WARS WDR25 ENSG00000258666 NDUFB3P4 HMGN1P25 GC14M100431 LOC105370664
GH14I100405 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -72.5 -72490 5.8 PKNOX1 MLX ARID4B DMAP1 SLC30A9 FOS REST ZNF592 MIER3 SMARCA4 LOC105370664 WDR25 WARS SLC25A47 GC14P100409 HMGN1P25
GH14I100416 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -63.5 -63453 2.2 HDGF PKNOX1 SIN3A RAD21 RFX5 ZNF143 RCOR1 FOS ATF7 CREM WARS WDR25 BEGAIN MIR337 MIR493 MIR431 MIR433 MIR127 MIR136 RTL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN1P25 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN1P25 Gene

Genomic Locations for HMGN1P25 Gene
chr14:100,480,881-100,482,078
(GRCh38/hg38)
Size:
1,198 bases
Orientation:
Plus strand
chr14:100,947,218-100,948,415
(GRCh37/hg19)

Genomic View for HMGN1P25 Gene

Genes around HMGN1P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P25 Gene

Proteins for HMGN1P25 Gene

Post-translational modifications for HMGN1P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P25 Gene

Domains & Families for HMGN1P25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P25 Gene

Function for HMGN1P25 Gene

Phenotypes From GWAS Catalog for HMGN1P25 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P25 Gene

Localization for HMGN1P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P25 Gene

Pathways & Interactions for HMGN1P25 Gene

SuperPathways for HMGN1P25 Gene

No Data Available

Interacting Proteins for HMGN1P25 Gene

Gene Ontology (GO) - Biological Process for HMGN1P25 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P25 Gene

Drugs & Compounds for HMGN1P25 Gene

No Compound Related Data Available

Transcripts for HMGN1P25 Gene

mRNA/cDNA for HMGN1P25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P25 Gene

No ASD Table

Relevant External Links for HMGN1P25 Gene

GeneLoc Exon Structure for
HMGN1P25
ECgene alternative splicing isoforms for
HMGN1P25

Expression for HMGN1P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P25 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P25 Gene:

HMGN1P25
genes like me logo Genes that share expression patterns with HMGN1P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P25 Gene

Orthologs for HMGN1P25 Gene

Evolution for HMGN1P25 Gene

ENSEMBL:
Gene Tree for HMGN1P25 (if available)
TreeFam:
Gene Tree for HMGN1P25 (if available)

No data available for Orthologs for HMGN1P25 Gene

Paralogs for HMGN1P25 Gene

No data available for Paralogs for HMGN1P25 Gene

Variants for HMGN1P25 Gene

Additional Variant Information for HMGN1P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P25 Gene

Disorders for HMGN1P25 Gene

No disorders were found for HMGN1P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P25 Gene

Publications for HMGN1P25 Gene

No publications were found for HMGN1P25 Gene.

Products for HMGN1P25 Gene

Sources for HMGN1P25 Gene

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