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Aliases for HMGN1P16 Gene

Subcategory (RNA class) for HMGN1P16 Gene


Aliases for HMGN1P16 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 16 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 16 2

External Ids for HMGN1P16 Gene

ORGUL Members for HMGN1P16 Gene

Previous GeneCards Identifiers for HMGN1P16 Gene

  • GC00U931242
  • GC05M147601

Summaries for HMGN1P16 Gene

GeneCards Summary for HMGN1P16 Gene

HMGN1P16 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HMGN1P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P16 Gene

Genomics for HMGN1P16 Gene

GeneHancer (GH) Regulatory Elements for HMGN1P16 Gene

Promoters and enhancers for HMGN1P16 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I148205 Enhancer 0.9 FANTOM5 Ensembl 0.4 +16.1 16086 0.5 RXRA MAX REST GABPA YY1 JUND HNF4G HNF4A ZBTB33 SPINK7 SPINK14 SPINK9 SPINK13 FBXO38 SPINK6 HMGN1P16
GH05I148202 Promoter/Enhancer 0.8 EPDnew ENCODE 0.4 +18.8 18784 0.9 CREB1 SPINK6 HMGN1P16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN1P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN1P16 Gene

Genomic Locations for HMGN1P16 Gene
283 bases
Minus strand

Genomic View for HMGN1P16 Gene

Genes around HMGN1P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P16 Gene

Proteins for HMGN1P16 Gene

Post-translational modifications for HMGN1P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P16 Gene

Domains & Families for HMGN1P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P16 Gene

Function for HMGN1P16 Gene

Phenotypes From GWAS Catalog for HMGN1P16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P16 Gene

Localization for HMGN1P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P16 Gene

Pathways & Interactions for HMGN1P16 Gene

SuperPathways for HMGN1P16 Gene

No Data Available

Interacting Proteins for HMGN1P16 Gene

Gene Ontology (GO) - Biological Process for HMGN1P16 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGN1P16 Gene

Drugs & Compounds for HMGN1P16 Gene

No Compound Related Data Available

Transcripts for HMGN1P16 Gene

mRNA/cDNA for HMGN1P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P16 Gene

No ASD Table

Relevant External Links for HMGN1P16 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGN1P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P16 Gene:

genes like me logo Genes that share expression patterns with HMGN1P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P16 Gene

Orthologs for HMGN1P16 Gene

Evolution for HMGN1P16 Gene

Gene Tree for HMGN1P16 (if available)
Gene Tree for HMGN1P16 (if available)

No data available for Orthologs for HMGN1P16 Gene

Paralogs for HMGN1P16 Gene

No data available for Paralogs for HMGN1P16 Gene

Variants for HMGN1P16 Gene

Additional Variant Information for HMGN1P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P16 Gene

Disorders for HMGN1P16 Gene

No disorders were found for HMGN1P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P16 Gene

Publications for HMGN1P16 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGN1P16 Gene

Sources for HMGN1P16 Gene

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