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Aliases for HMGN1P12 Gene

Aliases for HMGN1P12 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 12 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 12 2

External Ids for HMGN1P12 Gene

Previous GeneCards Identifiers for HMGN1P12 Gene

  • GC00U931324
  • GC05M070833

Summaries for HMGN1P12 Gene

GeneCards Summary for HMGN1P12 Gene

HMGN1P12 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 12) is a Pseudogene.

Additional gene information for HMGN1P12 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P12 Gene

Genomics for HMGN1P12 Gene

GeneHancer (GH) Regulatory Elements for HMGN1P12 Gene

Promoters and enhancers for HMGN1P12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I071533 Enhancer 0.7 Ensembl 0.8 +4.4 4441 0.4 ATF1 BACH1 JUNB MAFG BATF RFX5 ZNF121 ATF4 ZNF316 SMARCA4 HMGN1P12 LOC100419852 BDP1
GH05I071481 Enhancer 0.8 ENCODE 0.2 +54.6 54620 2.8 ELF3 FOXA2 NFIB RARA RFX5 ZSCAN5C FOS ZNF362 CEBPB SP1 MCCC2 BDP1 LOC653080 GUSBP9 SMN1 MRPS27 NAIP LOC100419852 HMGN1P12
GH05I071577 Enhancer 0.5 ENCODE 0.3 -40.3 -40272 1.1 ZNF217 CTBP1 ESRRA GATA3 ZNF544 DPF2 TCF7L2 MCCC2 HMGN1P12 BDP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN1P12 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN1P12 Gene

Genomic Locations for HMGN1P12 Gene
chr5:71,537,652-71,537,846
(GRCh38/hg38)
Size:
195 bases
Orientation:
Minus strand

Genomic View for HMGN1P12 Gene

Genes around HMGN1P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P12 Gene

Proteins for HMGN1P12 Gene

Post-translational modifications for HMGN1P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P12 Gene

Domains & Families for HMGN1P12 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P12 Gene

Function for HMGN1P12 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P12 Gene

Localization for HMGN1P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P12 Gene

Pathways & Interactions for HMGN1P12 Gene

SuperPathways for HMGN1P12 Gene

No Data Available

Interacting Proteins for HMGN1P12 Gene

Gene Ontology (GO) - Biological Process for HMGN1P12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P12 Gene

Drugs & Compounds for HMGN1P12 Gene

No Compound Related Data Available

Transcripts for HMGN1P12 Gene

mRNA/cDNA for HMGN1P12 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P12 Gene

No ASD Table

Relevant External Links for HMGN1P12 Gene

GeneLoc Exon Structure for
HMGN1P12
ECgene alternative splicing isoforms for
HMGN1P12

Expression for HMGN1P12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P12 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P12 Gene:

HMGN1P12
genes like me logo Genes that share expression patterns with HMGN1P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P12 Gene

Orthologs for HMGN1P12 Gene

Evolution for HMGN1P12 Gene

ENSEMBL:
Gene Tree for HMGN1P12 (if available)
TreeFam:
Gene Tree for HMGN1P12 (if available)

No data available for Orthologs for HMGN1P12 Gene

Paralogs for HMGN1P12 Gene

No data available for Paralogs for HMGN1P12 Gene

Variants for HMGN1P12 Gene

Additional Variant Information for HMGN1P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P12 Gene

Disorders for HMGN1P12 Gene

No disorders were found for HMGN1P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P12 Gene

Publications for HMGN1P12 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGN1P12 Gene

Sources for HMGN1P12 Gene

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