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Aliases for HMGB3P24 Gene

Aliases for HMGB3P24 Gene

  • High Mobility Group Box 3 Pseudogene 24 2 3 5
  • High-Mobility Group Box 3 Pseudogene 24 2

External Ids for HMGB3P24 Gene

Previous GeneCards Identifiers for HMGB3P24 Gene

  • GC09M036305

Summaries for HMGB3P24 Gene

GeneCards Summary for HMGB3P24 Gene

HMGB3P24 (High Mobility Group Box 3 Pseudogene 24) is a Pseudogene.

Additional gene information for HMGB3P24 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P24 Gene

Genomics for HMGB3P24 Gene

GeneHancer (GH) Regulatory Elements for HMGB3P24 Gene

Promoters and enhancers for HMGB3P24 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I036306 Enhancer 1 Ensembl ENCODE 555.5 -1.8 -1849 1.2 ELF3 ZNF792 SAP130 ARID4B CEBPG DMAP1 ZIC2 KMT2B TEAD3 ZNF121 HMGB3P24 MRPS21P4
GH09I035726 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 20.7 +574.6 574605 8.6 YBX1 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC MEF2D TLN1 CREB3 TMEM8B GBA2 ARHGEF39 TPM2 HMGB3P24 PIGO RN7SL22P ENSG00000228843
GH09I035813 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 13 +490.4 490357 3.1 HDGF FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 TMEM8B HINT2 HMGB3P24 RNF38 SPAG8 C9orf131 ATP8B5P VCP CREB3
GH09I037119 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.6 -815.9 -815861 2.7 HDGF PKNOX1 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZBTB7B ZCCHC7 LOC105376034 EXOSC3 DCAF10 TRMT10B ZBTB5 HMGB3P24 GC09P037160
GH09I035487 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.7 +814.5 814525 5.5 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 ZNF766 ZNF213 E2F8 ZNF143 RUSC2 LOC105376026 PIGO RGP1 FANCG ARHGEF39 TMEM8B FAM214B SPAG8 FAM166B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGB3P24 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB3P24 Gene

Genomic Locations for HMGB3P24 Gene
chr9:36,302,682-36,305,020
(GRCh38/hg38)
Size:
2,339 bases
Orientation:
Minus strand
chr9:36,302,685-36,305,013
(GRCh37/hg19)

Genomic View for HMGB3P24 Gene

Genes around HMGB3P24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P24 Gene

Proteins for HMGB3P24 Gene

Post-translational modifications for HMGB3P24 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P24 Gene

Domains & Families for HMGB3P24 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P24 Gene

Function for HMGB3P24 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P24 Gene

Localization for HMGB3P24 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB3P24 Gene

Pathways & Interactions for HMGB3P24 Gene

SuperPathways for HMGB3P24 Gene

No Data Available

Interacting Proteins for HMGB3P24 Gene

Gene Ontology (GO) - Biological Process for HMGB3P24 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB3P24 Gene

Drugs & Compounds for HMGB3P24 Gene

No Compound Related Data Available

Transcripts for HMGB3P24 Gene

mRNA/cDNA for HMGB3P24 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P24 Gene

No ASD Table

Relevant External Links for HMGB3P24 Gene

GeneLoc Exon Structure for
HMGB3P24
ECgene alternative splicing isoforms for
HMGB3P24

Expression for HMGB3P24 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB3P24 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P24 Gene:

HMGB3P24
genes like me logo Genes that share expression patterns with HMGB3P24: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB3P24 Gene

Orthologs for HMGB3P24 Gene

Evolution for HMGB3P24 Gene

ENSEMBL:
Gene Tree for HMGB3P24 (if available)
TreeFam:
Gene Tree for HMGB3P24 (if available)

No data available for Orthologs for HMGB3P24 Gene

Paralogs for HMGB3P24 Gene

No data available for Paralogs for HMGB3P24 Gene

Variants for HMGB3P24 Gene

Additional Variant Information for HMGB3P24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB3P24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P24 Gene

Disorders for HMGB3P24 Gene

No disorders were found for HMGB3P24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P24 Gene

Publications for HMGB3P24 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGB3P24 Gene

Sources for HMGB3P24 Gene

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