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Aliases for HMGB3P13 Gene

Aliases for HMGB3P13 Gene

  • High Mobility Group Box 3 Pseudogene 13 2 3 5
  • High-Mobility Group Box 3 Pseudogene 13 2

External Ids for HMGB3P13 Gene

Previous GeneCards Identifiers for HMGB3P13 Gene

  • GC03P134158

Summaries for HMGB3P13 Gene

GeneCards Summary for HMGB3P13 Gene

HMGB3P13 (High Mobility Group Box 3 Pseudogene 13) is a Pseudogene.

Additional gene information for HMGB3P13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P13 Gene

Genomics for HMGB3P13 Gene

GeneHancer (GH) Regulatory Elements for HMGB3P13 Gene

Promoters and enhancers for HMGB3P13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I134426 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -9.9 -9912 3.1 MLX SIN3A RAD21 BRCA1 RARA RFX5 RCOR1 FOS SMARCC1 SP5 ANAPC13 HMGB3P13 HMGN1P9
GH03I134419 Enhancer 0.8 ENCODE 0.4 -17.7 -17735 0.7 ELF3 FOXA2 MLX ARID4B DMAP1 THRB ZNF48 RARA ATF7 CREM HMGB3P13 HMGN1P9
GH03I134404 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 -31.2 -31228 3.9 SP1 POLR2A SIN3A EZH2 HMGN1P9 HMGB3P13
GH03I134392 Enhancer 0.6 ENCODE dbSUPER 0.3 -44.8 -44833 1.1 NFIC NFIB HMGN1P9 HMGB3P13
GH03I134393 Enhancer 0.3 dbSUPER 0.3 -41.8 -41808 3.5 NR2F2 AMOTL2 HMGN1P9 ANAPC13 CEP63 ENSG00000260633 HMGB3P13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGB3P13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB3P13 Gene

Genomic Locations for HMGB3P13 Gene
chr3:134,437,502-134,438,388
(GRCh38/hg38)
Size:
887 bases
Orientation:
Plus strand
chr3:134,156,447-134,157,053
(GRCh37/hg19)

Genomic View for HMGB3P13 Gene

Genes around HMGB3P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P13 Gene

Proteins for HMGB3P13 Gene

Post-translational modifications for HMGB3P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P13 Gene

Domains & Families for HMGB3P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P13 Gene

Function for HMGB3P13 Gene

Phenotypes From GWAS Catalog for HMGB3P13 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P13 Gene

Localization for HMGB3P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB3P13 Gene

Pathways & Interactions for HMGB3P13 Gene

SuperPathways for HMGB3P13 Gene

No Data Available

Interacting Proteins for HMGB3P13 Gene

Gene Ontology (GO) - Biological Process for HMGB3P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB3P13 Gene

Drugs & Compounds for HMGB3P13 Gene

No Compound Related Data Available

Transcripts for HMGB3P13 Gene

mRNA/cDNA for HMGB3P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P13 Gene

No ASD Table

Relevant External Links for HMGB3P13 Gene

GeneLoc Exon Structure for
HMGB3P13
ECgene alternative splicing isoforms for
HMGB3P13

Expression for HMGB3P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P13 Gene:

HMGB3P13
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB3P13 Gene

Orthologs for HMGB3P13 Gene

Evolution for HMGB3P13 Gene

ENSEMBL:
Gene Tree for HMGB3P13 (if available)
TreeFam:
Gene Tree for HMGB3P13 (if available)

No data available for Orthologs for HMGB3P13 Gene

Paralogs for HMGB3P13 Gene

No data available for Paralogs for HMGB3P13 Gene

Variants for HMGB3P13 Gene

Additional Variant Information for HMGB3P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB3P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P13 Gene

Disorders for HMGB3P13 Gene

No disorders were found for HMGB3P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P13 Gene

Publications for HMGB3P13 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGB3P13 Gene

Sources for HMGB3P13 Gene

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