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Aliases for HMGB3P10 Gene

Aliases for HMGB3P10 Gene

  • High Mobility Group Box 3 Pseudogene 10 2 3 5
  • High-Mobility Group Box 3 Pseudogene 10 2

External Ids for HMGB3P10 Gene

Previous GeneCards Identifiers for HMGB3P10 Gene

  • GC01P100165

Summaries for HMGB3P10 Gene

GeneCards Summary for HMGB3P10 Gene

HMGB3P10 (High Mobility Group Box 3 Pseudogene 10) is a Pseudogene.

Additional gene information for HMGB3P10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P10 Gene

Genomics for HMGB3P10 Gene

GeneHancer (GH) Regulatory Elements for HMGB3P10 Gene

Promoters and enhancers for HMGB3P10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I099681 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -15.6 -15600 2.8 INSM2 RAD21 BRCA1 RFX5 ZEB1 ZNF335 ZNF366 FOS SP3 CEBPB PALMD FRRS1 AGL GC01P099667 HMGB3P10
GH01I099684 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -12.9 -12853 1.9 CTCF FOXA2 MAX RAD21 YY1 CHAMP1 CC2D1A POLR2A ZNF143 SMC3 PALMD FRRS1 HMGB3P10 GC01P099667
GH01I099704 Enhancer 1 FANTOM5 Ensembl dbSUPER 0.4 +6.2 6217 0.5 KLF1 CTBP1 POLR2A GABPB1 IKZF1 ZBTB33 SPI1 SUPT5H HMGB3P10 FRRS1
GH01I099765 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.2 +68.2 68212 1.7 PKNOX1 SMAD1 ARID4B SIN3A ZNF2 BRCA1 YY1 TCF12 POLR2B E2F8 FRRS1 SASS6 TRMT13 HMGB3P10
GH01I099672 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 -24.9 -24893 2.6 PKNOX1 MAX RAD21 NFYB HNF4G CHD2 TCF7L2 RXRA USF2 CEBPB PALMD AGL GC01P099667 HMGB3P10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGB3P10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB3P10 Gene

Genomic Locations for HMGB3P10 Gene
chr1:99,698,215-99,699,197
(GRCh38/hg38)
Size:
983 bases
Orientation:
Plus strand
chr1:100,163,796-100,164,757
(GRCh37/hg19)

Genomic View for HMGB3P10 Gene

Genes around HMGB3P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P10 Gene

Proteins for HMGB3P10 Gene

Post-translational modifications for HMGB3P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P10 Gene

Domains & Families for HMGB3P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P10 Gene

Function for HMGB3P10 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P10 Gene

Localization for HMGB3P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB3P10 Gene

Pathways & Interactions for HMGB3P10 Gene

SuperPathways for HMGB3P10 Gene

No Data Available

Interacting Proteins for HMGB3P10 Gene

Gene Ontology (GO) - Biological Process for HMGB3P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB3P10 Gene

Drugs & Compounds for HMGB3P10 Gene

No Compound Related Data Available

Transcripts for HMGB3P10 Gene

mRNA/cDNA for HMGB3P10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P10 Gene

No ASD Table

Relevant External Links for HMGB3P10 Gene

GeneLoc Exon Structure for
HMGB3P10
ECgene alternative splicing isoforms for
HMGB3P10

Expression for HMGB3P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB3P10 Gene

mRNA differential expression in normal tissues according to GTEx for HMGB3P10 Gene

This gene is overexpressed in Adipose - Visceral (Omentum) (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P10 Gene:

HMGB3P10
genes like me logo Genes that share expression patterns with HMGB3P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB3P10 Gene

Orthologs for HMGB3P10 Gene

Evolution for HMGB3P10 Gene

ENSEMBL:
Gene Tree for HMGB3P10 (if available)
TreeFam:
Gene Tree for HMGB3P10 (if available)

No data available for Orthologs for HMGB3P10 Gene

Paralogs for HMGB3P10 Gene

No data available for Paralogs for HMGB3P10 Gene

Variants for HMGB3P10 Gene

Additional Variant Information for HMGB3P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB3P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P10 Gene

Disorders for HMGB3P10 Gene

No disorders were found for HMGB3P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P10 Gene

Publications for HMGB3P10 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGB3P10 Gene

Sources for HMGB3P10 Gene

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