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Aliases for HMGB2P1 Gene

Aliases for HMGB2P1 Gene

  • High Mobility Group Box 2 Pseudogene 1 2 3 5
  • High-Mobility Group Box 2 Pseudogene 1 2

External Ids for HMGB2P1 Gene

Previous GeneCards Identifiers for HMGB2P1 Gene

  • GC19P001204

Summaries for HMGB2P1 Gene

GeneCards Summary for HMGB2P1 Gene

HMGB2P1 (High Mobility Group Box 2 Pseudogene 1) is a Pseudogene.

Additional gene information for HMGB2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB2P1 Gene

Genomics for HMGB2P1 Gene

GeneHancer (GH) Regulatory Elements for HMGB2P1 Gene

Promoters and enhancers for HMGB2P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J001203 Enhancer 0.2 Ensembl 600.7 -0.7 -708 0.2 HMGB2P1 STK11
GH19J001202 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.7 +3.5 3548 8 HDGF ZNF652 ZFX SP1 CC2D1A ELF3 ZKSCAN8 MNT CBFA2T2 ZNF148 STK11 CIRBP TMEM259 DAZAP1 LOC100288123 TCF3 PTBP1 GRIN3B DOT1L POLRMT
GH19J001179 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -20.1 -20066 6.8 SP1 ELF3 NKRF ZNF121 ZNF687 NCOA3 MYC SP7 ELF1 RELA SBNO2 DAZAP1 MIER2 LOC100288123 TCF3 TMEM259 DOT1L PTBP1 MED16 ENSG00000267317
GH19J001194 Enhancer 1.1 ENCODE dbSUPER 0.4 -8.6 -8592 1.2 CTCF CC2D1A MNT MLLT1 ZNF384 MCM2 ZBTB7A SP7 SP5 RAD21 DOT1L LOC100288123 STK11 RNF126 DAZAP1 TCF3 HMGB2P1
GH19J001188 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -13.4 -13432 1.6 IKZF1 ZNF316 EGR1 TCF7L2 ZFHX2 FOSL2 ZNF18 DPF2 ZNF592 KLF17 POLRMT MIER2 HMGB2P1 STK11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HMGB2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB2P1 Gene

Genomic Locations for HMGB2P1 Gene
634 bases
Plus strand
613 bases
Plus strand

Genomic View for HMGB2P1 Gene

Genes around HMGB2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB2P1 Gene

Proteins for HMGB2P1 Gene

Post-translational modifications for HMGB2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB2P1 Gene

Domains & Families for HMGB2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB2P1 Gene

Function for HMGB2P1 Gene

Phenotypes From GWAS Catalog for HMGB2P1 Gene

Phenotypes for HMGB2P1 Gene

genes like me logo Genes that share phenotypes with HMGB2P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB2P1 Gene

Localization for HMGB2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB2P1 Gene

Pathways & Interactions for HMGB2P1 Gene

PathCards logo

SuperPathways for HMGB2P1 Gene

No Data Available

Interacting Proteins for HMGB2P1 Gene

Gene Ontology (GO) - Biological Process for HMGB2P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB2P1 Gene

Drugs & Compounds for HMGB2P1 Gene

No Compound Related Data Available

Transcripts for HMGB2P1 Gene

mRNA/cDNA for HMGB2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB2P1 Gene

No ASD Table

Relevant External Links for HMGB2P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB2P1 Gene

mRNA differential expression in normal tissues according to GTEx for HMGB2P1 Gene

This gene is overexpressed in Testis (x8.5).

NURSA nuclear receptor signaling pathways regulating expression of HMGB2P1 Gene:

genes like me logo Genes that share expression patterns with HMGB2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB2P1 Gene

Orthologs for HMGB2P1 Gene

Evolution for HMGB2P1 Gene

Gene Tree for HMGB2P1 (if available)
Gene Tree for HMGB2P1 (if available)

No data available for Orthologs for HMGB2P1 Gene

Paralogs for HMGB2P1 Gene

No data available for Paralogs for HMGB2P1 Gene

Variants for HMGB2P1 Gene

Additional Variant Information for HMGB2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB2P1 Gene

Disorders for HMGB2P1 Gene

No disorders were found for HMGB2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB2P1 Gene

Publications for HMGB2P1 Gene

No publications were found for HMGB2P1 Gene.

Products for HMGB2P1 Gene

Sources for HMGB2P1 Gene

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