Aliases for HMGB1P3 Gene

Aliases for HMGB1P3 Gene

  • High Mobility Group Box 1 Pseudogene 3 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 3 2 3
  • High-Mobility Group Box 1-Like 3 2 3
  • High-Mobility Group Box 1 Pseudogene 3 2
  • HMGB1L3 3
  • HMG1L3 3

External Ids for HMGB1P3 Gene

Previous HGNC Symbols for HMGB1P3 Gene

  • HMG1L3
  • HMGB1L3

Previous GeneCards Identifiers for HMGB1P3 Gene

  • GC02P231383

Summaries for HMGB1P3 Gene

GeneCards Summary for HMGB1P3 Gene

HMGB1P3 (High Mobility Group Box 1 Pseudogene 3) is a Pseudogene.

Additional gene information for HMGB1P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HMGB1P3 Gene

Genomics for HMGB1P3 Gene

GeneHancer (GH) Regulatory Elements for HMGB1P3 Gene

Promoters and enhancers for HMGB1P3 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J230513 Enhancer 1.2 FANTOM5 Ensembl ENCODE 500.7 -1.6 -1560 1.4 KDM6A TEAD1 FOXA2 NR2F2 SAP130 FOSL2 ZBTB33 JUND FOXP1 FOS HMGB1P3 lnc-SP110-8 RNU6-451P LOC101928816 NONHSAG030738.2 SP100
GH02J230520 Enhancer 0.8 Ensembl ENCODE 0.4 +5.9 5940 0.8 FOXA2 NR2F2 FOSL2 CEBPB ZBTB33 JUND FOS CEBPG RAD21 RXRA LOC101928816 RNU6-451P SP100 HMGB1P3 NONHSAG030738.2 ENSG00000235419
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HMGB1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB1P3 Gene

Genomic Locations for HMGB1P3 Gene
1,341 bases
Plus strand
1,341 bases
Plus strand

Genomic View for HMGB1P3 Gene

Genes around HMGB1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P3 Gene

Proteins for HMGB1P3 Gene

Post-translational modifications for HMGB1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P3 Gene

Domains & Families for HMGB1P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HMGB1P3 Gene

Function for HMGB1P3 Gene

Phenotypes From GWAS Catalog for HMGB1P3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P3 Gene

Localization for HMGB1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB1P3 Gene

Pathways & Interactions for HMGB1P3 Gene

PathCards logo

SuperPathways for HMGB1P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HMGB1P3 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HMGB1P3 Gene

Drugs & Compounds for HMGB1P3 Gene

No Compound Related Data Available

Transcripts for HMGB1P3 Gene

mRNA/cDNA for HMGB1P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P3 Gene

No ASD Table

Relevant External Links for HMGB1P3 Gene

GeneLoc Exon Structure for

Expression for HMGB1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGB1P3 Gene

mRNA differential expression in normal tissues according to GTEx for HMGB1P3 Gene

This gene is overexpressed in Whole Blood (x6.0).
genes like me logo Genes that share expression patterns with HMGB1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P3 Gene

Orthologs for HMGB1P3 Gene

Evolution for HMGB1P3 Gene

Gene Tree for HMGB1P3 (if available)
Gene Tree for HMGB1P3 (if available)

No data available for Orthologs for HMGB1P3 Gene

Paralogs for HMGB1P3 Gene

No data available for Paralogs for HMGB1P3 Gene

Variants for HMGB1P3 Gene

Additional Variant Information for HMGB1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P3 Gene

Disorders for HMGB1P3 Gene

No disorders were found for HMGB1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P3 Gene

Publications for HMGB1P3 Gene

  1. Mapping and molecular characterization of five HMG1-related DNA sequences. (PMID: 9925949) Rogalla P … Bullerdiek J (Cytogenetics and cell genetics 1998) 2 3 54
  2. Back to the roots of a new exon--the molecular archaeology of a SP100 splice variant. (PMID: 10766566) Rogalla P … Bullerdiek J (Genomics 2000) 3 54

Products for HMGB1P3 Gene

Sources for HMGB1P3 Gene