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Aliases for HMGB1P23 Gene

Subcategory (RNA class) for HMGB1P23 Gene


Aliases for HMGB1P23 Gene

  • High Mobility Group Box 1 Pseudogene 23 2 3 5
  • High-Mobility Group Box 1 Pseudogene 23 2

External Ids for HMGB1P23 Gene

ORGUL Members for HMGB1P23 Gene

Previous GeneCards Identifiers for HMGB1P23 Gene

  • GC00U931542
  • GC08P029077

Summaries for HMGB1P23 Gene

GeneCards Summary for HMGB1P23 Gene

HMGB1P23 (High Mobility Group Box 1 Pseudogene 23) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for HMGB1P23 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P23 Gene

Genomics for HMGB1P23 Gene

GeneHancer (GH) Regulatory Elements for HMGB1P23 Gene

Promoters and enhancers for HMGB1P23 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I029218 Enhancer 0.4 dbSUPER 550.8 +0.1 113 1.3 ZNF366 ZC3H11A HMGB1P23 KIF13B ENSG00000259366 INTS9 RPS15AP24
GH08I029257 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 0.3 +41.9 41939 6.5 HDGF PKNOX1 ATF1 FOXA2 SIN3A ZNF48 YY1 ETS1 ZNF143 ATF7 KIF13B HMGB1P23
GH08I029224 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.2 7153 2.6 HDGF ATF1 PKNOX1 FOXA2 ARNT IRF4 BRCA1 TCF12 ZNF766 GATA2 KIF13B ENSG00000254129 HMGB1P23
GH08I029228 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +11.5 11472 3.7 PKNOX1 FOXA2 SMAD1 IRF4 TCF12 ATF7 RUNX3 SMARCA4 GLIS1 HMBOX1 KIF13B ENSG00000254129 HMGB1P23
GH08I029248 Enhancer 1.2 Ensembl ENCODE 0.3 +31.7 31684 4.6 SMAD1 ATF1 ARNT IRF4 NCOA2 TCF12 ZNF766 GATA2 E2F8 FOS ENSG00000254129 KIF13B ZNF395 HMGB1P23
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGB1P23 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB1P23 Gene

Genomic Locations for HMGB1P23 Gene
568 bases
Plus strand

Genomic View for HMGB1P23 Gene

Genes around HMGB1P23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P23 Gene

Proteins for HMGB1P23 Gene

Post-translational modifications for HMGB1P23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P23 Gene

Domains & Families for HMGB1P23 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P23 Gene

Function for HMGB1P23 Gene

Phenotypes From GWAS Catalog for HMGB1P23 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P23 Gene

Localization for HMGB1P23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB1P23 Gene

Pathways & Interactions for HMGB1P23 Gene

SuperPathways for HMGB1P23 Gene

No Data Available

Interacting Proteins for HMGB1P23 Gene

Gene Ontology (GO) - Biological Process for HMGB1P23 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB1P23 Gene

Drugs & Compounds for HMGB1P23 Gene

No Compound Related Data Available

Transcripts for HMGB1P23 Gene

mRNA/cDNA for HMGB1P23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P23 Gene

No ASD Table

Relevant External Links for HMGB1P23 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB1P23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P23 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P23 Gene:

genes like me logo Genes that share expression patterns with HMGB1P23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P23 Gene

Orthologs for HMGB1P23 Gene

Evolution for HMGB1P23 Gene

Gene Tree for HMGB1P23 (if available)
Gene Tree for HMGB1P23 (if available)

No data available for Orthologs for HMGB1P23 Gene

Paralogs for HMGB1P23 Gene

No data available for Paralogs for HMGB1P23 Gene

Variants for HMGB1P23 Gene

Additional Variant Information for HMGB1P23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P23 Gene

Disorders for HMGB1P23 Gene

No disorders were found for HMGB1P23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P23 Gene

Publications for HMGB1P23 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGB1P23 Gene

Sources for HMGB1P23 Gene

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