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Aliases for HLA-X Gene

Aliases for HLA-X Gene

  • Major Histocompatibility Complex, Class I, X (Pseudogene) 2 3

External Ids for HLA-X Gene

Previous GeneCards Identifiers for HLA-X Gene

  • GC06U900020
  • GC06M031431
  • GC06M031433
  • GC06M031444

Summaries for HLA-X Gene

GeneCards Summary for HLA-X Gene

HLA-X (Major Histocompatibility Complex, Class I, X (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-X Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-X Gene

Genomics for HLA-X Gene

GeneHancer (GH) Regulatory Elements for HLA-X Gene

Promoters and enhancers for HLA-X Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I031461 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 550.8 -0.8 -751 2.7 ATF1 SMAD1 RB1 ARID4B ZNF76 BRCA1 ZNF48 RFX5 YY1 ZNF335 ENSG00000233902 HLA-X HLA-C MICB PSORS1C2 MICA HLA-B SKIV2L MICA-AS1 ENSG00000272501
GH06I031441 Enhancer 1 Ensembl ENCODE 0.3 +20.7 20685 0.5 RB1 ARID4B ZNF2 ZNF48 RAD21 RFX5 ARID2 ZNF143 ATF7 ZNF654 LINC01149 MICA-AS1 MICB PPIAP9 MCCD1 RPL15P4 SNORD117 DDX39B ENSG00000271581 STK19B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HLA-X on UCSC Golden Path with GeneCards custom track

Genomic Locations for HLA-X Gene

Genomic Locations for HLA-X Gene
chr6:31,461,846-31,462,490
(GRCh38/hg38)
Size:
645 bases
Orientation:
Minus strand
chr6:31,429,623-31,430,267
(GRCh37/hg19)

Genomic View for HLA-X Gene

Genes around HLA-X on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-X Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-X Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HLA-X Gene

Proteins for HLA-X Gene

Post-translational modifications for HLA-X Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-X Gene

Domains & Families for HLA-X Gene

Gene Families for HLA-X Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-X: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-X Gene

Function for HLA-X Gene

Molecular function for HLA-X Gene

GENATLAS Biochemistry:
HLA class I-like gene X

Phenotypes From GWAS Catalog for HLA-X Gene

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-X Gene

Localization for HLA-X Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-X Gene

Pathways & Interactions for HLA-X Gene

SuperPathways for HLA-X Gene

No Data Available

Interacting Proteins for HLA-X Gene

Gene Ontology (GO) - Biological Process for HLA-X Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-X Gene

Drugs & Compounds for HLA-X Gene

No Compound Related Data Available

Transcripts for HLA-X Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-X Gene

No ASD Table

Relevant External Links for HLA-X Gene

GeneLoc Exon Structure for
HLA-X
ECgene alternative splicing isoforms for
HLA-X

No data available for mRNA/cDNA for HLA-X Gene

Expression for HLA-X Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-X Gene

Orthologs for HLA-X Gene

No data available for Orthologs and Evolution for HLA-X Gene

Paralogs for HLA-X Gene

No data available for Paralogs for HLA-X Gene

Variants for HLA-X Gene

Additional Variant Information for HLA-X Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-X

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-X Gene

Disorders for HLA-X Gene

No disorders were found for HLA-X Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HLA-X Gene

Publications for HLA-X Gene

  1. A novel coding sequence belonging to a new multicopy gene family mapping within the human MHC class I region. (PMID: 8462994) Vernet C … Pontarotti P (Immunogenetics 1993) 2 3 58
  2. Physical mapping between the S and HLA-E genes in the human MHC class I region: construction of a BAC, PAC, and cosmid contig. (PMID: 9799336) Shiina T … Inoko H (Immunogenetics 1998) 3 58

Products for HLA-X Gene

Sources for HLA-X Gene

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