Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HLA-V Gene

Aliases for HLA-V Gene

  • Major Histocompatibility Complex, Class I, V (Pseudogene) 2 3 5
  • HLA-75 Pseudogene 2 3
  • Histocompatibility Antigen-Related 3
  • DJ377H14.4 3
  • HLA-75 3

External Ids for HLA-V Gene

Previous HGNC Symbols for HLA-V Gene

  • HLA-75

Previous GeneCards Identifiers for HLA-V Gene

  • GC06Pc29901
  • GC06P029760
  • GC06P029762
  • GC06P029563
  • GC06P029764
  • GC06P029769
  • GC06P030023
  • GC06P030175
  • GC06P030015
  • GC06P030084
  • GC06P030328
  • GC06P030480
  • GC06P030680
  • GC06P030843
  • GC06P031007

Summaries for HLA-V Gene

GeneCards Summary for HLA-V Gene

HLA-V (Major Histocompatibility Complex, Class I, V (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-V Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-V Gene

Genomics for HLA-V Gene

GeneHancer (GH) Regulatory Elements for HLA-V Gene

Promoters and enhancers for HLA-V Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I029789 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 550.8 +0.6 614 3.9 CTCF PKNOX1 NR2F1 CEBPB USF2 MAX RAD21 YY1 JUND MTA1 HCG4 HLA-V HLA-H ZNRD1 HLA-A HLA-T ZNRD1ASP HCG4P3 ZFP57 TRIM31-AS1
GH06I029907 Enhancer 0.8 ENCODE 18.5 +117.8 117798 2.7 FOXA2 ZFP64 CEBPG THRB RAD21 RARA ETS1 FOSL1 HNF4G NR2F6 MCCD1P1 HLA-J HLA-G HCG4 HLA-A ZFP57 HCG4P7 HLA-V MICD HLA-H
GH06I029886 Promoter/Enhancer 1.2 Ensembl ENCODE 12.3 +96.8 96781 3 IRF2 BACH1 YY1 RFX5 POLR2A ZSCAN29 IKZF2 RUNX3 EZH2 ZNF687 HLA-H HCG4P7 ERVK9-12 HLA-J HLA-A ZFP57 HCG4P5 MICD HLA-K ZNRD1
GH06I030739 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 4.9 +952.0 951952 6.5 CLOCK MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 ZNF263 SP3 FLOT1 HCG20 IER3 IER3-AS1 DDX39B DHX16 PPP1R10 RPL3P2 LY6G5B NRM
GH06I030725 Enhancer 1.1 ENCODE dbSUPER 5.8 +935.1 935132 1.5 HNRNPUL1 ARNT ZFP64 ARID4B SIN3A ZNF2 ZNF48 ZNF121 POLR2B E2F8 DDX39B LY6G5B DHX16 TRIM39 NRM MDC1 PPP1R10 HLA-F-AS1 ZNRD1 TCF19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HLA-V on UCSC Golden Path with GeneCards custom track

Genomic Locations for HLA-V Gene

Genomic Locations for HLA-V Gene
chr6:29,790,954-29,797,811
(GRCh38/hg38)
Size:
6,858 bases
Orientation:
Plus strand
chr6:29,758,731-29,765,588
(GRCh37/hg19)

Genomic View for HLA-V Gene

Genes around HLA-V on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-V Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-V Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-V Gene

Post-translational modifications for HLA-V Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-V Gene

Domains & Families for HLA-V Gene

Gene Families for HLA-V Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-V: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-V Gene

Function for HLA-V Gene

Phenotypes From GWAS Catalog for HLA-V Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-V Gene

Localization for HLA-V Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-V Gene

Pathways & Interactions for HLA-V Gene

SuperPathways for HLA-V Gene

No Data Available

Interacting Proteins for HLA-V Gene

Gene Ontology (GO) - Biological Process for HLA-V Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-V Gene

Drugs & Compounds for HLA-V Gene

No Compound Related Data Available

Transcripts for HLA-V Gene

mRNA/cDNA for HLA-V Gene

(1) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-V Gene

No ASD Table

Relevant External Links for HLA-V Gene

GeneLoc Exon Structure for
HLA-V
ECgene alternative splicing isoforms for
HLA-V

Expression for HLA-V Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-V Gene

mRNA differential expression in normal tissues according to GTEx for HLA-V Gene

This gene is overexpressed in Testis (x9.9) and Lung (x9.1).
genes like me logo Genes that share expression patterns with HLA-V: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-V Gene

Orthologs for HLA-V Gene

Evolution for HLA-V Gene

ENSEMBL:
Gene Tree for HLA-V (if available)
TreeFam:
Gene Tree for HLA-V (if available)

No data available for Orthologs for HLA-V Gene

Paralogs for HLA-V Gene

No data available for Paralogs for HLA-V Gene

Variants for HLA-V Gene

Additional Variant Information for HLA-V Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-V

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-V Gene

Disorders for HLA-V Gene

Additional Disease Information for HLA-V

No disorders were found for HLA-V Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-V Gene

Publications for HLA-V Gene

  1. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 58
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin EL … Gygi SP (Cell 2015) 3 58
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) Oláh J … Ovádi J (The Journal of biological chemistry 2011) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  5. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 3 58

Products for HLA-V Gene

Sources for HLA-V Gene

Content
Loading form....