Aliases for HLA-P Gene

Aliases for HLA-P Gene

  • Major Histocompatibility Complex, Class I, P (Pseudogene) 2 3 5
  • HLA-90 Pseudogene 2 3
  • DJ377H14.3 2 3
  • Chromosome 6 Open Reading Frame 101 2
  • C6orf101 3
  • HLA-90 3
  • HLA-P 5

External Ids for HLA-P Gene

Previous HGNC Symbols for HLA-P Gene

  • C6orf101
  • HLA-90

Previous GeneCards Identifiers for HLA-P Gene

  • GC06Pc29909
  • GC06P029761
  • GC06P029763
  • GC06P029572
  • GC06P029765
  • GC06P029773
  • GC06P030024
  • GC06P030176
  • GC06P030022
  • GC06P030086
  • GC06P032170
  • GC06P032415
  • GC06P032551
  • GC06P033166
  • GC06P030329
  • GC06P030481
  • GC06P030681
  • GC06P030844
  • GC06P031008
  • GC06P031164
  • GC06P031336
  • GC06P031585

Summaries for HLA-P Gene

GeneCards Summary for HLA-P Gene

HLA-P (Major Histocompatibility Complex, Class I, P (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HLA-P Gene

Genomics for HLA-P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HLA-P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J029797 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 -2.7 -2716 1.7 JUND MAFK USF2 MAFF HCG4 ZFP57 HLA-H ZNRD1ASP HLA-A ENSG00000227766 ENSG00000237669 POLR1H HLA-G TRIM31-AS1
GH06J029796 Enhancer 0.3 ENCODE dbSUPER 0.7 -3.9 -3864 0.3 HLA-A POLR1H ZNRD1ASP TRIM31-AS1 TRIM31 HCG4 HLA-G HLA-P HLA-V HLA-F
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HLA-P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HLA-P Gene

Genomic Locations for HLA-P Gene
chr6:29,800,044-29,803,079
(GRCh38/hg38)
Size:
3,036 bases
Orientation:
Plus strand
chr6:29,767,821-29,770,856
(GRCh37/hg19)
Size:
3,036 bases
Orientation:
Plus strand

Genomic View for HLA-P Gene

Genes around HLA-P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HLA-P Gene

Proteins for HLA-P Gene

No data available for DME Specific Peptides for HLA-P Gene

Domains & Families for HLA-P Gene

Gene Families for HLA-P Gene

genes like me logo Genes that share domains with HLA-P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HLA-P Gene

Function for HLA-P Gene

Phenotypes From GWAS Catalog for HLA-P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-P Gene

Localization for HLA-P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-P Gene

Pathways & Interactions for HLA-P Gene

PathCards logo

SuperPathways for HLA-P Gene

No Data Available

Gene Ontology (GO) - Biological Process for HLA-P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HLA-P Gene

Drugs & Compounds for HLA-P Gene

No Compound Related Data Available

Transcripts for HLA-P Gene

mRNA/cDNA for HLA-P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-P Gene

No ASD Table

Relevant External Links for HLA-P Gene

GeneLoc Exon Structure for
HLA-P

Expression for HLA-P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HLA-P Gene

mRNA differential expression in normal tissues according to GTEx for HLA-P Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with HLA-P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-P Gene

Orthologs for HLA-P Gene

Evolution for HLA-P Gene

ENSEMBL:
Gene Tree for HLA-P (if available)
TreeFam:
Gene Tree for HLA-P (if available)

No data available for Orthologs for HLA-P Gene

Paralogs for HLA-P Gene

No data available for Paralogs for HLA-P Gene

Variants for HLA-P Gene

Additional Variant Information for HLA-P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-P Gene

Disorders for HLA-P Gene

No disorders were found for HLA-P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HLA-P Gene

Publications for HLA-P Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 3
  2. The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments. (PMID: 1517563) Geraghty DE … Orr HT (Journal of immunology (Baltimore, Md. : 1950) 1992) 3

Products for HLA-P Gene

Sources for HLA-P Gene