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Aliases for HLA-DPA3 Gene

Aliases for HLA-DPA3 Gene

  • Major Histocompatibility Complex, Class II, DP Alpha 3 (Pseudogene) 2 3 5
  • DJ1033B10.14 3

External Ids for HLA-DPA3 Gene

Previous GeneCards Identifiers for HLA-DPA3 Gene

  • GC06U900017
  • GC06M033206
  • GC06Mo33239
  • GC06M033099

Summaries for HLA-DPA3 Gene

GeneCards Summary for HLA-DPA3 Gene

HLA-DPA3 (Major Histocompatibility Complex, Class II, DP Alpha 3 (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-DPA3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-DPA3 Gene

Genomics for HLA-DPA3 Gene

GeneHancer (GH) Regulatory Elements for HLA-DPA3 Gene

Promoters and enhancers for HLA-DPA3 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033144 Enhancer 0.6 ENCODE 650.7 -1.3 -1254 0.2 MEIS2 CTCF PKNOX1 YY2 MAX EBF1 MITF ZNF350 IKZF2 RUNX3 HCG24 HLA-DPA3 LOC105375021 LEMD2 BRD2 COL11A2 RXRB HLA-DPA1 HLA-DPB1 RPL32P1
GH06J033061 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 10.7 +81.2 81150 0.7 ATF1 FOXA2 CEBPG BATF KLF5 E4F1 IRF4 ZNF316 ELK1 ZNF143 HLA-DPA1 HLA-DQB1 TAP1 PSMB9 RNY4P10 RXRB SLC39A7 MIR219A1 HSD17B8 HLA-DPB1
GH06J033079 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 8.4 +62.6 62583 2 PKNOX1 SIN3A GLI4 ZNF2 ZNF121 GLIS2 ZNF213 ZNF143 KLF13 SP3 HLA-DPA1 RPL32P1 GC06P033079 HLA-DPB1 HLA-DPB2 PHF1 RING1 RXRB HLA-DMA HLA-DPA3
GH06J033056 Enhancer 0.8 ENCODE dbSUPER 10.7 +85.6 85630 2.2 SMAD5 HLF RFX5 POLR2A NFATC1 CREM PRDM1 SPI1 HLA-DPA1 RPL32P1 HSD17B8 SLC39A7 RNY4P10 RXRB MIR219A1 COL11A2 HLA-DPA3 TAP1
GH06J033111 Enhancer 0.9 Ensembl ENCODE 7.5 +29.6 29571 3.7 HDGF PKNOX1 ATF1 EBF1 ZBTB40 RFX5 RFXANK POLR2A EED ZNF143 HLA-DPB2 HLA-DPA1 HLA-DPB1 HSD17B8 COL11A2 RPS18 RPL32P1 HCG24 HLA-DPA3 HLA-DMA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HLA-DPA3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HLA-DPA3 Gene

Genomic Locations for HLA-DPA3 Gene
12,129 bases
Minus strand
12,129 bases
Minus strand

Genomic View for HLA-DPA3 Gene

Genes around HLA-DPA3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-DPA3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-DPA3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HLA-DPA3 Gene

Proteins for HLA-DPA3 Gene

Post-translational modifications for HLA-DPA3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-DPA3 Gene

Domains & Families for HLA-DPA3 Gene

Gene Families for HLA-DPA3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-DPA3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-DPA3 Gene

Function for HLA-DPA3 Gene

Phenotypes From GWAS Catalog for HLA-DPA3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-DPA3 Gene

Localization for HLA-DPA3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-DPA3 Gene

Pathways & Interactions for HLA-DPA3 Gene

SuperPathways for HLA-DPA3 Gene

No Data Available

Interacting Proteins for HLA-DPA3 Gene

Gene Ontology (GO) - Biological Process for HLA-DPA3 Gene


No data available for Pathways by source and SIGNOR curated interactions for HLA-DPA3 Gene

Drugs & Compounds for HLA-DPA3 Gene

No Compound Related Data Available

Transcripts for HLA-DPA3 Gene

mRNA/cDNA for HLA-DPA3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-DPA3 Gene

No ASD Table

Relevant External Links for HLA-DPA3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HLA-DPA3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-DPA3 Gene

mRNA differential expression in normal tissues according to GTEx for HLA-DPA3 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x7.8), Brain - Cerebellum (x6.2), and Spleen (x4.6).
genes like me logo Genes that share expression patterns with HLA-DPA3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-DPA3 Gene

Orthologs for HLA-DPA3 Gene

Evolution for HLA-DPA3 Gene

Gene Tree for HLA-DPA3 (if available)
Gene Tree for HLA-DPA3 (if available)

No data available for Orthologs for HLA-DPA3 Gene

Paralogs for HLA-DPA3 Gene

No data available for Paralogs for HLA-DPA3 Gene

Variants for HLA-DPA3 Gene

Additional Variant Information for HLA-DPA3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-DPA3 Gene

Disorders for HLA-DPA3 Gene

Additional Disease Information for HLA-DPA3

Genetic Association Database

No disorders were found for HLA-DPA3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-DPA3 Gene

Publications for HLA-DPA3 Gene

  1. Gene organisation, sequence variation and isochore structure at the centromeric boundary of the human MHC. (PMID: 10452889) Stephens R … Beck S (Journal of molecular biology 1999) 2 3 58
  2. A genome-wide association study on chronic HBV infection and its clinical progression in male Han-Taiwanese. (PMID: 24940741) Chang SW … Tai DI (PloS one 2014) 3 58
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58

Products for HLA-DPA3 Gene

Sources for HLA-DPA3 Gene

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