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Aliases for HLA-DPA2 Gene

Aliases for HLA-DPA2 Gene

  • Major Histocompatibility Complex, Class II, DP Alpha 2 (Pseudogene) 2 3 5
  • HLA-DP2A 3

External Ids for HLA-DPA2 Gene

Previous HGNC Symbols for HLA-DPA2 Gene

  • HLA-DP2A

Previous GeneCards Identifiers for HLA-DPA2 Gene

  • GC06U990044
  • GC06M033168
  • GC06M033169
  • GC06M032801

Summaries for HLA-DPA2 Gene

GeneCards Summary for HLA-DPA2 Gene

HLA-DPA2 (Major Histocompatibility Complex, Class II, DP Alpha 2 (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-DPA2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-DPA2 Gene

Genomics for HLA-DPA2 Gene

GeneHancer (GH) Regulatory Elements for HLA-DPA2 Gene

Promoters and enhancers for HLA-DPA2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I033092 Enhancer 0.9 ENCODE dbSUPER 0.4 +5.1 5116 0.2 HDGF SMARCA5 CTCF USF1 MAX TRIM22 SIN3A USF2 REST EBF1 HLA-DPB1 COL11A2 RNY4P10 RXRB SLC39A7 HSD17B8 MIR219A1 HLA-DPA2 HLA-DPA1 GC06M032900
GH06I033082 Enhancer 0.8 ENCODE dbSUPER 0.4 +14.4 14396 0.2 HDGF CTCF ZBTB6 TRIM22 CEBPB REST CEBPG RAD21 NR2F2 RFX5 HLA-DPB1 HLA-DPA1 HLA-DPA2 GC06M032900
GH06I033081 Enhancer 0.6 dbSUPER 0.4 +15.0 15013 0.9 HDGF CTCF ZNF366 TRIM22 ZBTB33 CEBPG PRDM1 NR2F2 HLA-DPA1 HLA-DPB1 HLA-DPB2 HLA-DMA HLA-DPA2 GC06M032900
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HLA-DPA2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HLA-DPA2 Gene

Genomic Locations for HLA-DPA2 Gene
chr6:33,091,482-33,097,295
(GRCh38/hg38)
Size:
5,814 bases
Orientation:
Minus strand
chr6:33,059,259-33,065,072
(GRCh37/hg19)

Genomic View for HLA-DPA2 Gene

Genes around HLA-DPA2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-DPA2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-DPA2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-DPA2 Gene

Post-translational modifications for HLA-DPA2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-DPA2 Gene

Domains & Families for HLA-DPA2 Gene

Gene Families for HLA-DPA2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-DPA2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-DPA2 Gene

Function for HLA-DPA2 Gene

Molecular function for HLA-DPA2 Gene

GENATLAS Biochemistry:
HLA-DP,alpha chain-related pseudogene

Phenotypes From GWAS Catalog for HLA-DPA2 Gene

Phenotypes for HLA-DPA2 Gene

GenomeRNAi human phenotypes for HLA-DPA2:
genes like me logo Genes that share phenotypes with HLA-DPA2: view

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-DPA2 Gene

Localization for HLA-DPA2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-DPA2 Gene

Pathways & Interactions for HLA-DPA2 Gene

SuperPathways for HLA-DPA2 Gene

No Data Available

Interacting Proteins for HLA-DPA2 Gene

Gene Ontology (GO) - Biological Process for HLA-DPA2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-DPA2 Gene

Drugs & Compounds for HLA-DPA2 Gene

No Compound Related Data Available

Transcripts for HLA-DPA2 Gene

mRNA/cDNA for HLA-DPA2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-DPA2 Gene

No ASD Table

Relevant External Links for HLA-DPA2 Gene

GeneLoc Exon Structure for
HLA-DPA2
ECgene alternative splicing isoforms for
HLA-DPA2

Expression for HLA-DPA2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-DPA2 Gene

mRNA differential expression in normal tissues according to GTEx for HLA-DPA2 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x20.7), Brain - Cerebellum (x16.6), and Small Intestine - Terminal Ileum (x5.8).
genes like me logo Genes that share expression patterns with HLA-DPA2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-DPA2 Gene

Orthologs for HLA-DPA2 Gene

Evolution for HLA-DPA2 Gene

ENSEMBL:
Gene Tree for HLA-DPA2 (if available)
TreeFam:
Gene Tree for HLA-DPA2 (if available)

No data available for Orthologs for HLA-DPA2 Gene

Paralogs for HLA-DPA2 Gene

No data available for Paralogs for HLA-DPA2 Gene

Variants for HLA-DPA2 Gene

Additional Variant Information for HLA-DPA2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-DPA2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-DPA2 Gene

Disorders for HLA-DPA2 Gene

Additional Disease Information for HLA-DPA2

Genetic Association Database
(GAD)

No disorders were found for HLA-DPA2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-DPA2 Gene

Publications for HLA-DPA2 Gene

  1. Molecular map of the human HLA-SB (HLA-DP) region and sequence of an SB alpha (DP alpha) pseudogene. (PMID: 6597088) Servenius B … Peterson PA (The EMBO journal 1984) 2 3 58
  2. A genome-wide association study identifies two new risk loci for Graves' disease. (PMID: 21841780) Chu X … China Consortium for Genetics of Autoimmune Thyroid Disease (Nature genetics 2011) 44 58

Products for HLA-DPA2 Gene

Sources for HLA-DPA2 Gene

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