Aliases for HLA-DPA2 Gene

Aliases for HLA-DPA2 Gene

  • Major Histocompatibility Complex, Class II, DP Alpha 2 (Pseudogene) 2 3 5
  • HLA-DP2A 3

External Ids for HLA-DPA2 Gene

Previous HGNC Symbols for HLA-DPA2 Gene

  • HLA-DP2A

Previous GeneCards Identifiers for HLA-DPA2 Gene

  • GC06U990044
  • GC06M033168
  • GC06M033169
  • GC06M033059
  • GC06M032801

Summaries for HLA-DPA2 Gene

GeneCards Summary for HLA-DPA2 Gene

HLA-DPA2 (Major Histocompatibility Complex, Class II, DP Alpha 2 (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-DPA2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HLA-DPA2 Gene

Genomics for HLA-DPA2 Gene

GeneHancer (GH) Regulatory Elements for HLA-DPA2 Gene

Promoters and enhancers for HLA-DPA2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033092 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 +3.9 3894 3.6 CTCF USF1 REST RAD21 TRIM22 SMC3 POLR2A YY1 SMARCA5 EBF1 HLA-DPB1 HLA-DPA1 COL11A2 RPL32P1 RNY4P10 RXRB SLC39A7 HSD17B8 MIR219A1 HLA-DMA
GH06J033082 Enhancer 0.8 ENCODE dbSUPER 0.4 +14.4 14396 0.2 CTCF TEAD4 REST RAD21 TRIM22 SMC3 NR2F2 CEBPB CEBPG YY1 lnc-BRD2-5 lnc-BRD2-6 HLA-DPB1 NONHSAG046509.2 HLA-DPA2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HLA-DPA2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HLA-DPA2 Gene

Genomic Locations for HLA-DPA2 Gene
5,814 bases
Minus strand
5,814 bases
Minus strand

Genomic View for HLA-DPA2 Gene

Genes around HLA-DPA2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-DPA2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-DPA2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-DPA2 Gene

Post-translational modifications for HLA-DPA2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-DPA2 Gene

Domains & Families for HLA-DPA2 Gene

Gene Families for HLA-DPA2 Gene

genes like me logo Genes that share domains with HLA-DPA2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HLA-DPA2 Gene

Function for HLA-DPA2 Gene

Molecular function for HLA-DPA2 Gene

GENATLAS Biochemistry:
HLA-DP,alpha chain-related pseudogene

Phenotypes From GWAS Catalog for HLA-DPA2 Gene

Phenotypes for HLA-DPA2 Gene

GenomeRNAi human phenotypes for HLA-DPA2:
genes like me logo Genes that share phenotypes with HLA-DPA2: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-DPA2 Gene

Localization for HLA-DPA2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-DPA2 Gene

Pathways & Interactions for HLA-DPA2 Gene

PathCards logo

SuperPathways for HLA-DPA2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HLA-DPA2 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HLA-DPA2 Gene

Drugs & Compounds for HLA-DPA2 Gene

No Compound Related Data Available

Transcripts for HLA-DPA2 Gene

mRNA/cDNA for HLA-DPA2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-DPA2 Gene

No ASD Table

Relevant External Links for HLA-DPA2 Gene

GeneLoc Exon Structure for

Expression for HLA-DPA2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HLA-DPA2 Gene

mRNA differential expression in normal tissues according to GTEx for HLA-DPA2 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x20.7), Brain - Cerebellum (x16.6), and Small Intestine - Terminal Ileum (x5.8).
genes like me logo Genes that share expression patterns with HLA-DPA2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-DPA2 Gene

Orthologs for HLA-DPA2 Gene

Evolution for HLA-DPA2 Gene

Gene Tree for HLA-DPA2 (if available)
Gene Tree for HLA-DPA2 (if available)

No data available for Orthologs for HLA-DPA2 Gene

Paralogs for HLA-DPA2 Gene

No data available for Paralogs for HLA-DPA2 Gene

Variants for HLA-DPA2 Gene

Additional Variant Information for HLA-DPA2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-DPA2 Gene

Disorders for HLA-DPA2 Gene

Additional Disease Information for HLA-DPA2

Genetic Association Database

No disorders were found for HLA-DPA2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-DPA2 Gene

Publications for HLA-DPA2 Gene

  1. Molecular map of the human HLA-SB (HLA-DP) region and sequence of an SB alpha (DP alpha) pseudogene. (PMID: 6597088) Servenius B … Peterson PA (The EMBO journal 1984) 2 3 54
  2. A genome-wide association study identifies two new risk loci for Graves' disease. (PMID: 21841780) Chu X … China Consortium for Genetics of Autoimmune Thyroid Disease (Nature genetics 2011) 41 54

Products for HLA-DPA2 Gene

Sources for HLA-DPA2 Gene