Aliases for HIKESHIP2 Gene

Aliases for HIKESHIP2 Gene

  • HIKESHI Pseudogene 2 2 3
  • Chromosome 11 Open Reading Frame 73 (C11orf73) Pseudogene 5
  • AC007229.1 5

External Ids for HIKESHIP2 Gene

Summaries for HIKESHIP2 Gene

GeneCards Summary for HIKESHIP2 Gene

HIKESHIP2 (HIKESHI Pseudogene 2) is a Pseudogene.

Additional gene information for HIKESHIP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HIKESHIP2 Gene

Genomics for HIKESHIP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HIKESHIP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J010839 Enhancer 1 Ensembl ENCODE 0.7 -2.0 -2039 1.6 LEF1 IKZF1 NR2C1 ZNF740 ZNF24 HDAC1 SOX6 TCF12 EP300 MGA SMARCA4 C19orf38 HIKESHIP2 CARM1 lnc-TIMM29-1
GH19J010848 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 0.4 +7.0 6962 2 ZNF189 POLR2A ZNF121 C19orf38 HIKESHIP2 CARM1 lnc-TIMM29-1
GH19J010862 Enhancer 1.1 ENCODE dbSUPER 0.4 +22.0 21981 2.3 ARHGAP35 CREB1 GATAD2A CTCF ATF7 PRDM10 ZNF629 IKZF1 JUND FOXA1 SMARCA4 CARM1 HIKESHIP2 C19orf38 lnc-TIMM29-1
GH19J010844 Enhancer 0.5 FANTOM5 Ensembl 0.7 +2.9 2864 0.6 CEBPG CEBPB SMARCA4 HIKESHIP2 C19orf38 CARM1 lnc-TIMM29-1
GH19J010852 Enhancer 0.8 Ensembl ENCODE 0.4 +11.9 11862 3.4 GATAD2A PRDM10 FOXA1 CEBPA ATF7 UBTF ZEB1 JUN JUND ZNF623 MIR199A1 SMARCA4 HIKESHIP2 C19orf38 CARM1 lnc-TIMM29-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HIKESHIP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HIKESHIP2 Gene

Genomic Locations for HIKESHIP2 Gene
chr19:10,841,839-10,842,250
(GRCh38/hg38)
Size:
412 bases
Orientation:
Plus strand
chr19:10,952,515-10,952,926
(GRCh37/hg19)
Size:
412 bases
Orientation:
Plus strand

Genomic View for HIKESHIP2 Gene

Genes around HIKESHIP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIKESHIP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIKESHIP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for HIKESHIP2 Gene

Proteins for HIKESHIP2 Gene

Post-translational modifications for HIKESHIP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIKESHIP2 Gene

Domains & Families for HIKESHIP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HIKESHIP2 Gene

Function for HIKESHIP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIKESHIP2 Gene

Localization for HIKESHIP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIKESHIP2 Gene

Pathways & Interactions for HIKESHIP2 Gene

PathCards logo

SuperPathways for HIKESHIP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HIKESHIP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HIKESHIP2 Gene

Drugs & Compounds for HIKESHIP2 Gene

No Compound Related Data Available

Transcripts for HIKESHIP2 Gene

mRNA/cDNA for HIKESHIP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HIKESHIP2 Gene

No ASD Table

Relevant External Links for HIKESHIP2 Gene

GeneLoc Exon Structure for
HIKESHIP2

Expression for HIKESHIP2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIKESHIP2 Gene

Orthologs for HIKESHIP2 Gene

Evolution for HIKESHIP2 Gene

ENSEMBL:
Gene Tree for HIKESHIP2 (if available)
TreeFam:
Gene Tree for HIKESHIP2 (if available)

No data available for Orthologs for HIKESHIP2 Gene

Paralogs for HIKESHIP2 Gene

No data available for Paralogs for HIKESHIP2 Gene

Variants for HIKESHIP2 Gene

Additional Variant Information for HIKESHIP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIKESHIP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIKESHIP2 Gene

Disorders for HIKESHIP2 Gene

No disorders were found for HIKESHIP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIKESHIP2 Gene

Publications for HIKESHIP2 Gene

No publications were found for HIKESHIP2 Gene.

No data available for Mastermind for HIKESHIP2 Gene

Products for HIKESHIP2 Gene

Sources for HIKESHIP2 Gene