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Aliases for HIGD1AP5 Gene

Subcategory (RNA class) for HIGD1AP5 Gene

lncRNA

Aliases for HIGD1AP5 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 5 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 5 2

External Ids for HIGD1AP5 Gene

ORGUL Members for HIGD1AP5 Gene

Previous GeneCards Identifiers for HIGD1AP5 Gene

  • GC11P018124

Summaries for HIGD1AP5 Gene

GeneCards Summary for HIGD1AP5 Gene

HIGD1AP5 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 5) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HIGD1AP5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIGD1AP5 Gene

Genomics for HIGD1AP5 Gene

GeneHancer (GH) Regulatory Elements for HIGD1AP5 Gene

Promoters and enhancers for HIGD1AP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I018105 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 -0.7 -721 1.7 HDGF SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 POLR2B SAAL1 HIGD1AP5 SPTY2D1 ENSG00000256361 TSG101 GTF2H1 MRGPRX3 ENSG00000256588 LOC100129966 TPH1
GH11I017985 Enhancer 1 ENCODE dbSUPER 9.7 -120.2 -120230 1.8 ELF3 SOX13 CTCF SAP130 CEBPG ZNF644 ZNF7 TEAD3 NR2F6 FOS SERGEF MYOD1 SAAL1 HIGD1AP5 GC11P017952
GH11I017999 Enhancer 0.8 dbSUPER 11.2 -105.6 -105615 3.5 ELF3 FOXA2 MLX ARID4B THRB ZSCAN9 RARA ZNF121 CREM THAP11 SERGEF HIGD1AP5 SAAL1 ENSG00000255448 GC11P017952
GH11I018259 Enhancer 0.8 ENCODE 10.2 +152.9 152876 0.1 SOX13 FOXA2 MAX CEBPG ZNF644 RAD21 YY1 TEAD3 LCORL HNF4G GC11M018255 SAA4 LOC494141 LOC645319 HIGD1AP5 SAAL1 ENSG00000255470 GLTPP1 HPS5 ST13P5
GH11I018760 Enhancer 0.4 dbSUPER 10.6 +655.0 655029 3.1 CTCF HLF MNT PTPN5 IGSF22 LOC105376579 HIGD1AP5 SAAL1 PIR60589
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HIGD1AP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HIGD1AP5 Gene

Genomic Locations for HIGD1AP5 Gene
chr11:18,106,583-18,106,843
(GRCh38/hg38)
Size:
261 bases
Orientation:
Plus strand
chr11:18,122,973-18,128,393
(GRCh37/hg19)

Genomic View for HIGD1AP5 Gene

Genes around HIGD1AP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIGD1AP5 Gene

Proteins for HIGD1AP5 Gene

Post-translational modifications for HIGD1AP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP5 Gene

Domains & Families for HIGD1AP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIGD1AP5 Gene

Function for HIGD1AP5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP5 Gene

Localization for HIGD1AP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIGD1AP5 Gene

Pathways & Interactions for HIGD1AP5 Gene

SuperPathways for HIGD1AP5 Gene

No Data Available

Interacting Proteins for HIGD1AP5 Gene

Gene Ontology (GO) - Biological Process for HIGD1AP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIGD1AP5 Gene

Drugs & Compounds for HIGD1AP5 Gene

No Compound Related Data Available

Transcripts for HIGD1AP5 Gene

mRNA/cDNA for HIGD1AP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP5 Gene

No ASD Table

Relevant External Links for HIGD1AP5 Gene

GeneLoc Exon Structure for
HIGD1AP5
ECgene alternative splicing isoforms for
HIGD1AP5

Expression for HIGD1AP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIGD1AP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIGD1AP5 Gene:

HIGD1AP5
genes like me logo Genes that share expression patterns with HIGD1AP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP5 Gene

Orthologs for HIGD1AP5 Gene

Evolution for HIGD1AP5 Gene

ENSEMBL:
Gene Tree for HIGD1AP5 (if available)
TreeFam:
Gene Tree for HIGD1AP5 (if available)

No data available for Orthologs for HIGD1AP5 Gene

Paralogs for HIGD1AP5 Gene

No data available for Paralogs for HIGD1AP5 Gene

Variants for HIGD1AP5 Gene

Additional Variant Information for HIGD1AP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIGD1AP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP5 Gene

Disorders for HIGD1AP5 Gene

No disorders were found for HIGD1AP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP5 Gene

Publications for HIGD1AP5 Gene

No publications were found for HIGD1AP5 Gene.

Products for HIGD1AP5 Gene

Sources for HIGD1AP5 Gene

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