Aliases for HIGD1AP5 Gene

Aliases for HIGD1AP5 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 5 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 5 2

External Ids for HIGD1AP5 Gene

Previous GeneCards Identifiers for HIGD1AP5 Gene

  • GC11P018124

Summaries for HIGD1AP5 Gene

GeneCards Summary for HIGD1AP5 Gene

HIGD1AP5 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 5) is a Pseudogene.

Additional gene information for HIGD1AP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HIGD1AP5 Gene

Genomics for HIGD1AP5 Gene

GeneHancer (GH) Regulatory Elements for HIGD1AP5 Gene

Promoters and enhancers for HIGD1AP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J018105 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -1.0 -982 2.4 SIN3A ZNF24 SP1 ZBTB40 CTCF RBPJ POLR2A CREB1 HCFC1 MYC SAAL1 MRGPRX3 HIGD1AP5 lnc-MRGPRX3-1 SPTY2D1 ENSG00000256361 TSG101 ENSG00000256282 ENSG00000256588 GTF2H1
GH11J017985 Enhancer 1.1 Ensembl ENCODE dbSUPER 9.7 -120.2 -120207 2 CTCF NR2F6 CREB1 ELF3 CEBPG PPARG HNF1A ZNF644 CEBPA GATAD2A SERGEF MYOD1 SAAL1 HIGD1AP5 RF00994-170 lnc-SERGEF-1
GH11J018259 Enhancer 0.7 ENCODE 10.2 +152.9 152876 0.1 LCORL HLF RAD21 SP1 CEBPG ZNF644 CEBPA RXRA GATAD2A RXRB piR-57461-029 SAA4 SLC25A51P4 ENSG00000254546 HIGD1AP5 SAAL1 ENSG00000255470 GLTPP1 HPS5 ST13P5
GH11J017999 Enhancer 0.4 Ensembl dbSUPER 11.2 -105.1 -105082 0.2 ATF1 SERGEF SAAL1 HIGD1AP5 ENSG00000255448 lnc-SERGEF-1 RF00994-170
GH11J018760 Enhancer 0.4 dbSUPER 10.6 +655.0 655029 3.1 HLF MNT CTCF ENSG00000286998 PTPN5 IGSF22 ENSG00000254966 HIGD1AP5 SAAL1 piR-43105-077
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HIGD1AP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HIGD1AP5 Gene

Genomic Locations for HIGD1AP5 Gene
chr11:18,106,583-18,106,843
(GRCh38/hg38)
Size:
261 bases
Orientation:
Plus strand
chr11:18,122,973-18,128,393
(GRCh37/hg19)
Size:
5,421 bases
Orientation:
Plus strand

Genomic View for HIGD1AP5 Gene

Genes around HIGD1AP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIGD1AP5 Gene

Proteins for HIGD1AP5 Gene

Post-translational modifications for HIGD1AP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP5 Gene

Domains & Families for HIGD1AP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HIGD1AP5 Gene

Function for HIGD1AP5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP5 Gene

Localization for HIGD1AP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIGD1AP5 Gene

Pathways & Interactions for HIGD1AP5 Gene

PathCards logo

SuperPathways for HIGD1AP5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HIGD1AP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIGD1AP5 Gene

Drugs & Compounds for HIGD1AP5 Gene

No Compound Related Data Available

Transcripts for HIGD1AP5 Gene

mRNA/cDNA for HIGD1AP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP5 Gene

No ASD Table

Relevant External Links for HIGD1AP5 Gene

GeneLoc Exon Structure for
HIGD1AP5
ECgene alternative splicing isoforms for
HIGD1AP5

Expression for HIGD1AP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIGD1AP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIGD1AP5 Gene:

HIGD1AP5
genes like me logo Genes that share expression patterns with HIGD1AP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP5 Gene

Orthologs for HIGD1AP5 Gene

Evolution for HIGD1AP5 Gene

ENSEMBL:
Gene Tree for HIGD1AP5 (if available)
TreeFam:
Gene Tree for HIGD1AP5 (if available)

No data available for Orthologs for HIGD1AP5 Gene

Paralogs for HIGD1AP5 Gene

No data available for Paralogs for HIGD1AP5 Gene

Variants for HIGD1AP5 Gene

Additional Variant Information for HIGD1AP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIGD1AP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP5 Gene

Disorders for HIGD1AP5 Gene

No disorders were found for HIGD1AP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP5 Gene

Publications for HIGD1AP5 Gene

No publications were found for HIGD1AP5 Gene.

No data available for External Links for HIGD1AP5 Gene

Products for HIGD1AP5 Gene

Sources for HIGD1AP5 Gene