Aliases for HIGD1AP13 Gene

Aliases for HIGD1AP13 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 13 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 13 2
  • HIGD1AP13 5

External Ids for HIGD1AP13 Gene

Previous GeneCards Identifiers for HIGD1AP13 Gene

  • GC04M079571

Summaries for HIGD1AP13 Gene

GeneCards Summary for HIGD1AP13 Gene

HIGD1AP13 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 13) is a Pseudogene.

Additional gene information for HIGD1AP13 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HIGD1AP13 Gene

Genomics for HIGD1AP13 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HIGD1AP13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J078649 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 600.7 -1.2 -1238 1.8 LEF1 IKZF1 ZHX2 JUND MTA2 PKNOX1 MTA1 NR2C1 DPF2 HDAC1 HIGD1AP13 lnc-PAQR3-2 ENSG00000239793 BMP2K CNOT6L LINC01094 MN298119 ANXA3
GH04J078647 Promoter/Enhancer 0.5 Ensembl dbSUPER 600.7 +1.9 1850 0.4 HIGD1AP13 lnc-PAQR3-2 ENSG00000239793 BMP2K LINC01094 SNODB718 ANXA3
GH04J078656 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.6 -8606 2.1 LEF1 IKZF1 JUND ETV6 STAT3 MTA2 RELA PKNOX1 MTA1 REST LINC01094 BMP2K HIGD1AP13 MN298119 ANXA3
GH04J078661 Enhancer 1.1 ENCODE dbSUPER 0.4 -12.9 -12882 1.7 GATAD2A SOX13 RCOR2 RELA RXRB IRF2 IKZF2 RCOR1 SP1 TRIM22 ENSG00000200998 LINC01094 HIGD1AP13 MN298119 ANXA3 BMP2K
GH04J078671 Enhancer 0.9 ENCODE dbSUPER 0.4 -23.3 -23294 1.9 LEF1 MTA2 PKNOX1 ZNF740 ZNF24 HDAC1 SOX6 TCF12 EP300 CBX3 ENSG00000200998 LINC01094 MN298119 ENSG00000287632 HIGD1AP13 BMP2K ANXA3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HIGD1AP13 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HIGD1AP13 Gene

Genomic Locations for HIGD1AP13 Gene
chr4:78,648,954-78,649,251
(GRCh38/hg38)
Size:
298 bases
Orientation:
Minus strand
chr4:79,570,108-79,570,396
(GRCh37/hg19)
Size:
289 bases
Orientation:
Minus strand

Genomic View for HIGD1AP13 Gene

Genes around HIGD1AP13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIGD1AP13 Gene

Proteins for HIGD1AP13 Gene

Post-translational modifications for HIGD1AP13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP13 Gene

Domains & Families for HIGD1AP13 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HIGD1AP13 Gene

Function for HIGD1AP13 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP13 Gene

Localization for HIGD1AP13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIGD1AP13 Gene

Pathways & Interactions for HIGD1AP13 Gene

PathCards logo

SuperPathways for HIGD1AP13 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HIGD1AP13 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HIGD1AP13 Gene

Drugs & Compounds for HIGD1AP13 Gene

No Compound Related Data Available

Transcripts for HIGD1AP13 Gene

mRNA/cDNA for HIGD1AP13 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP13 Gene

No ASD Table

Relevant External Links for HIGD1AP13 Gene

GeneLoc Exon Structure for
HIGD1AP13

Expression for HIGD1AP13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HIGD1AP13 Gene

genes like me logo Genes that share expression patterns with HIGD1AP13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP13 Gene

Orthologs for HIGD1AP13 Gene

Evolution for HIGD1AP13 Gene

ENSEMBL:
Gene Tree for HIGD1AP13 (if available)
TreeFam:
Gene Tree for HIGD1AP13 (if available)

No data available for Orthologs for HIGD1AP13 Gene

Paralogs for HIGD1AP13 Gene

No data available for Paralogs for HIGD1AP13 Gene

Variants for HIGD1AP13 Gene

Additional Variant Information for HIGD1AP13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIGD1AP13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP13 Gene

Disorders for HIGD1AP13 Gene

No disorders were found for HIGD1AP13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP13 Gene

Publications for HIGD1AP13 Gene

No publications were found for HIGD1AP13 Gene.

No data available for Mastermind for HIGD1AP13 Gene

Products for HIGD1AP13 Gene

Sources for HIGD1AP13 Gene