HIGD1AP12 Gene (Pseudogene)

HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 12

GC01P111380
GIFtS:
5
See more...

Aliases for HIGD1AP12 Gene

Aliases for HIGD1AP12 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 12 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 12 2
  • HIGD1AP12 5

External Ids for HIGD1AP12 Gene

Previous GeneCards Identifiers for HIGD1AP12 Gene

  • GC01P111918

Summaries for HIGD1AP12 Gene

GeneCards Summary for HIGD1AP12 Gene

HIGD1AP12 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 12) is a Pseudogene.

Additional gene information for HIGD1AP12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HIGD1AP12 Gene

Genomics for HIGD1AP12 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for HIGD1AP12 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J111371 Enhancer 0.3 ENCODE 0.4 -7.8 -7836 2.3 RFX5 LOC105378904 PIFO ENSG00000260948 HIGD1AP12 OVGP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HIGD1AP12 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HIGD1AP12 Gene

Genomic Locations for HIGD1AP12 Gene
chr1:111,380,188-111,380,769
(GRCh38/hg38)
Size:
582 bases
Orientation:
Plus strand
chr1:111,917,924-111,923,194
(GRCh37/hg19)
Size:
5,271 bases
Orientation:
Plus strand

Genomic View for HIGD1AP12 Gene

Genes around HIGD1AP12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP12 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HIGD1AP12 Gene

Proteins for HIGD1AP12 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HIGD1AP12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP12 Gene

Domains & Families for HIGD1AP12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HIGD1AP12 Gene

Function for HIGD1AP12 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for HIGD1AP12 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP12 Gene

Localization for HIGD1AP12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIGD1AP12 Gene

Pathways & Interactions for HIGD1AP12 Gene

PathCards logo

SuperPathways for HIGD1AP12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HIGD1AP12 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HIGD1AP12 Gene

Drugs & Compounds for HIGD1AP12 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HIGD1AP12 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for HIGD1AP12 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP12 Gene

No ASD Table

Relevant External Links for HIGD1AP12 Gene

GeneLoc Exon Structure for
HIGD1AP12

Expression for HIGD1AP12 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HIGD1AP12 Gene

mRNA expression in normal human tissues for HIGD1AP12 Gene
mRNA expression by GTEx for HIGD1AP12 Gene
genes like me logo Genes that share expression patterns with HIGD1AP12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP12 Gene

Orthologs for HIGD1AP12 Gene

Evolution for HIGD1AP12 Gene

ENSEMBL:
Gene Tree for HIGD1AP12 (if available)
TreeFam:
Gene Tree for HIGD1AP12 (if available)

No data available for Orthologs for HIGD1AP12 Gene

Paralogs for HIGD1AP12 Gene

No data available for Paralogs for HIGD1AP12 Gene

Variants for HIGD1AP12 Gene

Additional Variant Information for HIGD1AP12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIGD1AP12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP12 Gene

Disorders for HIGD1AP12 Gene

No disorders were found for HIGD1AP12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP12 Gene

Publications for HIGD1AP12 Gene

No publications were found for HIGD1AP12 Gene.

No data available for Mastermind for HIGD1AP12 Gene

Products for HIGD1AP12 Gene

Sources for HIGD1AP12 Gene