Aliases for HID1-AS1 Gene

Subcategory (RNA class) for HID1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for HID1-AS1 Gene

  • HID1 Antisense RNA 1 2 3 5
  • HID1-AS1 2 5 165
  • NONHSAG022720.2 91
  • HSALNG0118697 164

External Ids for HID1-AS1 Gene

Summaries for HID1-AS1 Gene

GeneCards Summary for HID1-AS1 Gene

HID1-AS1 (HID1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HID1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HID1-AS1 Gene

Genomics for HID1-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HID1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HID1-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HID1-AS1 Gene

Genomic Locations for HID1-AS1 Gene
chr17:74,970,689-74,976,279
(GRCh38/hg38)
Size:
5,591 bases
Orientation:
Plus strand
chr17:72,966,799-72,971,823
(GRCh37/hg19)
Size:
5,025 bases
Orientation:
Plus strand

Genomic View for HID1-AS1 Gene

Genes around HID1-AS1 on UCSC Golden Path with GeneCards custom track
HID1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
HID1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HID1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HID1-AS1 Gene

Proteins for HID1-AS1 Gene

Post-translational modifications for HID1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HID1-AS1 Gene

Domains & Families for HID1-AS1 Gene

Gene Families for HID1-AS1 Gene

genes like me logo Genes that share domains with HID1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HID1-AS1 Gene

Function for HID1-AS1 Gene

Phenotypes From GWAS Catalog for HID1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HID1-AS1 Gene

Localization for HID1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HID1-AS1 Gene

Pathways & Interactions for HID1-AS1 Gene

PathCards logo

SuperPathways for HID1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HID1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HID1-AS1 Gene

Drugs & Compounds for HID1-AS1 Gene

No Compound Related Data Available

Transcripts for HID1-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HID1-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075B87B_9606 lncRNA 830 4

HGNC: 51181,

RefSeq: NR_110878,

LncBook: HSALNT0245206,

LNCipedia: HID1-AS1:1,

URS000053D61E_9606 lncRNA 815 4

Ensembl: ENST00000577295 (view in UCSC) ,

LncBook: HSALNT0245207,

LNCipedia: HID1-AS1:2,

NONCODE: NONHSAT055831.2,

URS00008B5F97_9606 lncRNA 1144 2

LncBook: HSALNT0245208,

LNCipedia: HID1-AS1:3,

HID1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for HID1-AS1 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for HID1-AS1 Gene

No ASD Table

Relevant External Links for HID1-AS1 Gene

GeneLoc Exon Structure for
HID1-AS1

Expression for HID1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HID1-AS1 Gene

genes like me logo Genes that share expression patterns with HID1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HID1-AS1 Gene

Orthologs for HID1-AS1 Gene

Evolution for HID1-AS1 Gene

ENSEMBL:
Gene Tree for HID1-AS1 (if available)
TreeFam:
Gene Tree for HID1-AS1 (if available)

No data available for Orthologs for HID1-AS1 Gene

Paralogs for HID1-AS1 Gene

No data available for Paralogs for HID1-AS1 Gene

Variants for HID1-AS1 Gene

Additional dbSNP identifiers (rs#s) for HID1-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for HID1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3641252 CNV loss 21293372
nsv1056788 CNV gain 25217958
nsv457909 CNV gain 19166990
nsv470601 CNV loss 18288195
nsv518292 CNV loss 19592680
nsv576026 CNV gain 21841781
nsv833540 CNV loss 17160897

Additional Variant Information for HID1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HID1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for HID1-AS1 Gene

Disorders for HID1-AS1 Gene

No disorders were found for HID1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HID1-AS1 Gene

Publications for HID1-AS1 Gene

No publications were found for HID1-AS1 Gene.

No data available for Mastermind for HID1-AS1 Gene

Products for HID1-AS1 Gene

Sources for HID1-AS1 Gene