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Aliases for HHIP-AS1 Gene

Subcategory (RNA class) for HHIP-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for HHIP-AS1 Gene

  • HHIP Antisense RNA 1 2 3 5
  • HHIP Antisense RNA 1 (Non-Protein Coding) 2

External Ids for HHIP-AS1 Gene

Previous GeneCards Identifiers for HHIP-AS1 Gene

  • GC04M145565

Summaries for HHIP-AS1 Gene

GeneCards Summary for HHIP-AS1 Gene

HHIP-AS1 (HHIP Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for HHIP-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HHIP-AS1 Gene

Genomics for HHIP-AS1 Gene

GeneHancer (GH) Regulatory Elements for HHIP-AS1 Gene

Promoters and enhancers for HHIP-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I144658 Enhancer 0.5 dbSUPER 550.8 +0.5 539 4.6 PRDM6 TEAD4 ZBTB11 ZNF140 ZNF266 ZNF623 MAFK HHIP-AS1 ENSG00000248356 RTN3P1 HHIP GYPA
GH04I144578 Enhancer 0.9 Ensembl ENCODE 11 +79.8 79777 6.7 ELF3 CTCF FOXA2 JUN SIN3A ZNF384 RAD21 GATA3 FOSL2 RXRA HHIP HHIP-AS1 KRT18P51 GYPA
GH04I144708 Enhancer 0.7 Ensembl ENCODE 11.5 -49.0 -49011 4.6 JUND JUN CREB1 FOS HHIP HHIP-AS1 GC04P144686 ENSG00000273621 GYPA
GH04I144627 Enhancer 0.5 ENCODE dbSUPER 13 +33.5 33493 0.4 JUN HHIP-AS1 HHIP KRT18P51 GYPA
GH04I144700 Enhancer 0.4 ENCODE 11.4 -40.1 -40091 1.4 RXRA NR2F2 HHIP-AS1 HHIP RTN3P1 GC04P144686 ENSG00000273621 GYPA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HHIP-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HHIP-AS1 Gene

Genomic Locations for HHIP-AS1 Gene
chr4:144,642,916-144,661,357
(GRCh38/hg38)
Size:
18,442 bases
Orientation:
Minus strand
chr4:145,564,068-145,582,509
(GRCh37/hg19)

Genomic View for HHIP-AS1 Gene

Genes around HHIP-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HHIP-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HHIP-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HHIP-AS1 Gene

Proteins for HHIP-AS1 Gene

Post-translational modifications for HHIP-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HHIP-AS1 Gene

Domains & Families for HHIP-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HHIP-AS1 Gene

Function for HHIP-AS1 Gene

Phenotypes From GWAS Catalog for HHIP-AS1 Gene

Phenotypes for HHIP-AS1 Gene

GenomeRNAi human phenotypes for HHIP-AS1:
genes like me logo Genes that share phenotypes with HHIP-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HHIP-AS1 Gene

Localization for HHIP-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HHIP-AS1 Gene

Pathways & Interactions for HHIP-AS1 Gene

SuperPathways for HHIP-AS1 Gene

No Data Available

Interacting Proteins for HHIP-AS1 Gene

Gene Ontology (GO) - Biological Process for HHIP-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HHIP-AS1 Gene

Drugs & Compounds for HHIP-AS1 Gene

No Compound Related Data Available

Transcripts for HHIP-AS1 Gene

mRNA/cDNA for HHIP-AS1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HHIP-AS1 Gene

HHIP antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HHIP-AS1 Gene

No ASD Table

Relevant External Links for HHIP-AS1 Gene

GeneLoc Exon Structure for
HHIP-AS1
ECgene alternative splicing isoforms for
HHIP-AS1

Expression for HHIP-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HHIP-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for HHIP-AS1 Gene

This gene is overexpressed in Pancreas (x4.1).

SOURCE GeneReport for Unigene cluster for HHIP-AS1 Gene:

Hs.632595
genes like me logo Genes that share expression patterns with HHIP-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HHIP-AS1 Gene

Orthologs for HHIP-AS1 Gene

Evolution for HHIP-AS1 Gene

ENSEMBL:
Gene Tree for HHIP-AS1 (if available)
TreeFam:
Gene Tree for HHIP-AS1 (if available)

No data available for Orthologs for HHIP-AS1 Gene

Paralogs for HHIP-AS1 Gene

No data available for Paralogs for HHIP-AS1 Gene

Variants for HHIP-AS1 Gene

Sequence variations from dbSNP and Humsavar for HHIP-AS1 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000473829 -- 144,645,701(-) A/T intron_variant
rs1000565486 -- 144,643,627(-) C/T non_coding_transcript_variant
rs1000695586 -- 144,644,720(-) T/G intron_variant
rs1000762802 -- 144,645,933(-) C/G non_coding_transcript_variant
rs1001220551 -- 144,644,360(-) A/T intron_variant

Additional Variant Information for HHIP-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HHIP-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HHIP-AS1 Gene

Disorders for HHIP-AS1 Gene

Additional Disease Information for HHIP-AS1

No disorders were found for HHIP-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HHIP-AS1 Gene

Publications for HHIP-AS1 Gene

  1. Meta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci. (PMID: 25429064) He M … Qi L (Human molecular genetics 2015) 3 58
  2. IREB2 and GALC are associated with pulmonary artery enlargement in chronic obstructive pulmonary disease. (PMID: 25101718) Lee JH … COPDGene and ECLIPSE Investigators (American journal of respiratory cell and molecular biology 2015) 3 58
  3. Genetic susceptibility for chronic bronchitis in chronic obstructive pulmonary disease. (PMID: 25241909) Lee JH … COPDGene and ECLIPSE Investigators (Respiratory research 2014) 3 58
  4. Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture. (PMID: 23563607) Berndt SI … Ingelsson E (Nature genetics 2013) 3 58
  5. Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function. (PMID: 20010835) Hancock DB … London SJ (Nature genetics 2010) 3 58

Products for HHIP-AS1 Gene

Sources for HHIP-AS1 Gene

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