Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HERC2P10 Gene

Aliases for HERC2P10 Gene

  • Hect Domain And RLD 2 Pseudogene 10 2 3 5
  • WUGSC:H_DJ1086D14.1 3
  • H_DJ1086D14.1 3

External Ids for HERC2P10 Gene

Previous GeneCards Identifiers for HERC2P10 Gene

  • GC00U931405
  • GC15P031099
  • GC15P031101
  • GC15P031103
  • GC15P031105
  • GC15P031108
  • GC15P030816
  • GC15P030820
  • GC15P030829
  • GC15P030830
  • GC15P030858
  • GC15P030872
  • GC15P030887

Summaries for HERC2P10 Gene

GeneCards Summary for HERC2P10 Gene

HERC2P10 (Hect Domain And RLD 2 Pseudogene 10) is a Pseudogene.

Additional gene information for HERC2P10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HERC2P10 Gene

Genomics for HERC2P10 Gene

GeneHancer (GH) Regulatory Elements for HERC2P10 Gene

Promoters and enhancers for HERC2P10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I030988 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 12.7 +175.3 175333 4.8 PKNOX1 FOXA2 ARID4B SIN3A YY1 POLR2B ZNF207 ZNF143 REST ZNF592 MTMR10 HERC2P10 TRPM1 RNU6-466P FAN1 ENSG00000260382 ENSG00000215302 GC15M030957
GH15I030903 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 12.7 +88.8 88807 1.8 HDGF PKNOX1 SMAD1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B FAN1 HERC2P10 RNU6-466P MTMR10 PIR52520
GH15I030627 Enhancer 0.6 dbSUPER 9.3 -186.6 -186566 1.4 SMARCA5 BCOR ZNF189 CHAMP1 E2F1 KDM1A MLLT1 PRDM10 GOLGA8Q HERC2P10 ARHGAP11B DNM1P50 LOC100288637
GH15I030961 Enhancer 0.4 ENCODE dbSUPER 12.4 +146.4 146355 0.5 MTMR10 HERC2P10 FAN1 TRPM1 ENSG00000260382 ENSG00000215302 GC15M030957
GH15I030955 Enhancer 0.6 dbSUPER 5.5 +141.2 141188 2.6 MEIS2 USF2 MAX CEBPB ZMYM3 CEBPG ZNF398 ZNF623 ATF2 ATF4 GC15M030957 RNU6-466P MTMR10 ENSG00000215302 CHRFAM7A GOLGA8R HERC2P10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HERC2P10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HERC2P10 Gene

Genomic Locations for HERC2P10 Gene
chr15:30,815,271-30,844,153
(GRCh38/hg38)
Size:
28,883 bases
Orientation:
Plus strand
chr15:31,092,103-31,136,356
(GRCh37/hg19)

Genomic View for HERC2P10 Gene

Genes around HERC2P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HERC2P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HERC2P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HERC2P10 Gene

Proteins for HERC2P10 Gene

Post-translational modifications for HERC2P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HERC2P10 Gene

Domains & Families for HERC2P10 Gene

Suggested Antigen Peptide Sequences for HERC2P10 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for HERC2P10 Gene

Function for HERC2P10 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HERC2P10 Gene

Localization for HERC2P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HERC2P10 Gene

Pathways & Interactions for HERC2P10 Gene

SuperPathways for HERC2P10 Gene

No Data Available

Interacting Proteins for HERC2P10 Gene

Gene Ontology (GO) - Biological Process for HERC2P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HERC2P10 Gene

Drugs & Compounds for HERC2P10 Gene

No Compound Related Data Available

Transcripts for HERC2P10 Gene

mRNA/cDNA for HERC2P10 Gene

(1) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HERC2P10 Gene

Hect domain and RLD 2 pseudogene 10:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HERC2P10 Gene

No ASD Table

Relevant External Links for HERC2P10 Gene

GeneLoc Exon Structure for
HERC2P10
ECgene alternative splicing isoforms for
HERC2P10

Expression for HERC2P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HERC2P10 Gene

mRNA differential expression in normal tissues according to GTEx for HERC2P10 Gene

This gene is overexpressed in Testis (x9.7), Brain - Cerebellum (x5.8), Brain - Cerebellar Hemisphere (x5.3), and Pancreas (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of HERC2P10 Gene:

HERC2P10

SOURCE GeneReport for Unigene cluster for HERC2P10 Gene:

Hs.721293
genes like me logo Genes that share expression patterns with HERC2P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HERC2P10 Gene

Orthologs for HERC2P10 Gene

Evolution for HERC2P10 Gene

ENSEMBL:
Gene Tree for HERC2P10 (if available)
TreeFam:
Gene Tree for HERC2P10 (if available)

No data available for Orthologs for HERC2P10 Gene

Paralogs for HERC2P10 Gene

No data available for Paralogs for HERC2P10 Gene

Variants for HERC2P10 Gene

Sequence variations from dbSNP and Humsavar for HERC2P10 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000251764 -- 30,817,956(+) A/G upstream_transcript_variant
rs1001257233 -- 30,824,031(+) G/A intron_variant
rs1001603893 -- 30,823,796(+) T/A intron_variant
rs1002073818 -- 30,819,439(+) TTTAATTT/TTT intron_variant
rs1002694014 -- 30,816,593(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for HERC2P10 Gene

Variant ID Type Subtype PubMed ID
nsv984044 CNV duplication 23825009
nsv832950 CNV gain 17160897
nsv525795 CNV gain 19592680
nsv456744 CNV gain 19166990
nsv1148560 OTHER inversion 26484159
nsv1053014 CNV gain 25217958
nsv1046874 CNV gain 25217958
esv3892647 CNV loss 25118596
esv3636036 CNV gain 21293372
esv3569376 CNV gain 25503493
esv2760022 CNV gain+loss 17122850
dgv4425n54 CNV gain 21841781
dgv2533n100 CNV loss 25217958
dgv2526n100 CNV loss 25217958
dgv2505n100 CNV loss 25217958

Additional Variant Information for HERC2P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HERC2P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HERC2P10 Gene

Disorders for HERC2P10 Gene

Additional Disease Information for HERC2P10

No disorders were found for HERC2P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HERC2P10 Gene

Publications for HERC2P10 Gene

No publications were found for HERC2P10 Gene.

Products for HERC2P10 Gene

Sources for HERC2P10 Gene

Content
Loading form....