Aliases for HE856222 Gene

Subcategory (RNA class) for HE856222 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for HE856222 Gene

No Aliases found

No data available for External Ids for HE856222 Gene

Summaries for HE856222 Gene

GeneCards Summary for HE856222 Gene

HE856222 is an RNA Gene, and is affiliated with the snRNA class.

Additional gene information for HE856222 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HE856222 Gene

Genomics for HE856222 Gene

GeneHancer (GH) Regulatory Elements for HE856222 Gene

Promoters and enhancers for HE856222 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J080900 Enhancer 0.9 Ensembl ENCODE dbSUPER 500.7 -1.7 -1712 3.2 JUND FOS FOSL2 BATF PAX5 ZNF664 JUNB ATF2 JUN ZNF24 HE856222 SEMA3C GNAT3 lnc-GNAT3-7
GH07J080894 Enhancer 0.6 Ensembl dbSUPER 0.7 +4.9 4921 0.6 OSR2 ZSCAN16 ZNF843 PRDM6 FEZF1 ZNF580 SEMA3C HE856222 piR-41405-090 lnc-GNAT3-7
GH07J080896 Enhancer 0.6 Ensembl dbSUPER 0.7 +2.7 2722 1.4 CUX1 MYC FOXA1 ZBTB40 SEMA3C HE856222 piR-41405-090 lnc-GNAT3-7
GH07J080890 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +9.4 9396 1.3 ZNF341 OSR2 ZNF316 SMARCA4 MAFK ZNF680 PKNOX1 SEMA3C piR-41405-090 HE856222 lnc-GNAT3-7
GH07J080908 Enhancer 0.8 ENCODE dbSUPER 0.4 -7.1 -7078 0.2 REST MXI1 OSR2 ZBTB17 POLR2A ZNF335 JUND RCOR1 PRDM6 FEZF1 HE856222 lnc-GNAT3-7 SEMA3C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HE856222 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HE856222 Gene

Genomic Locations for HE856222 Gene
chr7:80,900,146-80,900,222
(GRCh38/hg38)
Size:
77 bases
Orientation:
Minus strand

Genomic View for HE856222 Gene

Genes around HE856222 on UCSC Golden Path with GeneCards custom track

HE856222 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HE856222 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HE856222 Gene

Proteins for HE856222 Gene

Post-translational modifications for HE856222 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HE856222 Gene

Domains & Families for HE856222 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HE856222 Gene

Function for HE856222 Gene

miRNA for HE856222 Gene

miRTarBase miRNAs that target HE856222

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HE856222 Gene

Localization for HE856222 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HE856222 Gene

Pathways & Interactions for HE856222 Gene

PathCards logo

SuperPathways for HE856222 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for HE856222 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HE856222 Gene

Drugs & Compounds for HE856222 Gene

No Compound Related Data Available

Transcripts for HE856222 Gene

mRNA/cDNA for HE856222 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for HE856222 Gene

No ASD Table

Relevant External Links for HE856222 Gene

GeneLoc Exon Structure for
HE856222

Expression for HE856222 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HE856222 Gene

Orthologs for HE856222 Gene

No data available for Orthologs and Evolution for HE856222 Gene

Paralogs for HE856222 Gene

No data available for Paralogs for HE856222 Gene

Variants for HE856222 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HE856222 Gene

Disorders for HE856222 Gene

No disorders were found for HE856222 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HE856222 Gene

Publications for HE856222 Gene

No publications were found for HE856222 Gene.

No data available for Mastermind for HE856222 Gene

Products for HE856222 Gene

Sources for HE856222 Gene