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Aliases for HCG9P5 Gene

Aliases for HCG9P5 Gene

  • HLA Complex Group 9 Pseudogene 5 2 3
  • HCGIX-5 Pseudogene 3
  • DJ377H14.6 3
  • HCGIX-5 3

External Ids for HCG9P5 Gene

Previous GeneCards Identifiers for HCG9P5 Gene

  • GC06P029823
  • GC06P029824
  • GC06M029824
  • GC06P029717
  • GC06P029519
  • GC06Pj29711
  • GC06P029804
  • GC06P030025
  • GC06P030177
  • GC06P030052
  • GC06P030093
  • GC06P030338
  • GC06P030483
  • GC06P030685
  • GC06P030847
  • GC06P031012

Summaries for HCG9P5 Gene

GeneCards Summary for HCG9P5 Gene

HCG9P5 (HLA Complex Group 9 Pseudogene 5) is a Pseudogene.

Additional gene information for HCG9P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG9P5 Gene

Genomics for HCG9P5 Gene

GeneHancer (GH) Regulatory Elements for HCG9P5 Gene

Promoters and enhancers for HCG9P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I029747 Promoter/Enhancer 1.5 Ensembl ENCODE 550.8 +0.6 627 1.9 PKNOX1 SIN3A DMAP1 GLI4 ZNF48 YY1 GLIS2 ZNF207 FOS ATF7 MICE ENSG00000199290 GC06P031261 GC06P031580 HCG9P5 HLA-F-AS1 RPL23AP1 HCG4P5 HLA-A ZNRD1
GH06I030611 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10.6 +867.3 867298 8.7 CLOCK MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 PPP1R10 MRPS18B DDX39B MDC1 TRIM39 ABCF1 NRM DHX16 ZNRD1 TRIM26
GH06I030715 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 11 +971.3 971272 7.7 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 MDC1 TUBB DDX39B TRIM39 DHX16 LY6G5B PPP1R10 ZNRD1 PAIP1P1 NRM
GH06I030554 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.6 +808.4 808370 3.6 CLOCK DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 SSRP1 GLIS1 GNL1 PIR57735 PRR3 DDX39B TRIM39 DHX16 PPP1R10 NRM ZNRD1 MDC1
GH06I030739 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.6 +994.7 994652 6.5 CLOCK MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 ZNF263 SP3 FLOT1 HCG20 IER3 IER3-AS1 DDX39B DHX16 PPP1R10 RPL3P2 LY6G5B NRM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HCG9P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HCG9P5 Gene

Genomic Locations for HCG9P5 Gene
chr6:29,748,254-29,748,648
(GRCh38/hg38)
Size:
395 bases
Orientation:
Plus strand
chr6:29,716,031-29,716,425
(GRCh37/hg19)

Genomic View for HCG9P5 Gene

Genes around HCG9P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HCG9P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HCG9P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HCG9P5 Gene

Post-translational modifications for HCG9P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HCG9P5 Gene

Domains & Families for HCG9P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HCG9P5 Gene

Function for HCG9P5 Gene

Phenotypes From GWAS Catalog for HCG9P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HCG9P5 Gene

Localization for HCG9P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HCG9P5 Gene

Pathways & Interactions for HCG9P5 Gene

SuperPathways for HCG9P5 Gene

No Data Available

Interacting Proteins for HCG9P5 Gene

Gene Ontology (GO) - Biological Process for HCG9P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HCG9P5 Gene

Drugs & Compounds for HCG9P5 Gene

No Compound Related Data Available

Transcripts for HCG9P5 Gene

mRNA/cDNA for HCG9P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HCG9P5 Gene

No ASD Table

Relevant External Links for HCG9P5 Gene

GeneLoc Exon Structure for
HCG9P5
ECgene alternative splicing isoforms for
HCG9P5

Expression for HCG9P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HCG9P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of HCG9P5 Gene:

HCG9P5
genes like me logo Genes that share expression patterns with HCG9P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HCG9P5 Gene

Orthologs for HCG9P5 Gene

Evolution for HCG9P5 Gene

ENSEMBL:
Gene Tree for HCG9P5 (if available)
TreeFam:
Gene Tree for HCG9P5 (if available)

No data available for Orthologs for HCG9P5 Gene

Paralogs for HCG9P5 Gene

No data available for Paralogs for HCG9P5 Gene

Variants for HCG9P5 Gene

Additional Variant Information for HCG9P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HCG9P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HCG9P5 Gene

Disorders for HCG9P5 Gene

No disorders were found for HCG9P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HCG9P5 Gene

Publications for HCG9P5 Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 2 3 58

Products for HCG9P5 Gene

Sources for HCG9P5 Gene

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