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Aliases for HCG4P5 Gene

Subcategory (RNA class) for HCG4P5 Gene


Aliases for HCG4P5 Gene

  • HLA Complex Group 4 Pseudogene 5 2 3 5
  • HCGIV-05 Pseudogene 2 3
  • HCGIV-05 3
  • HCGIV-5 3
  • HCGIV.4 3

External Ids for HCG4P5 Gene

ORGUL Members for HCG4P5 Gene

Previous GeneCards Identifiers for HCG4P5 Gene

  • GC00U913608
  • GC06M030014
  • GC06M030016
  • GC06M029912
  • GC06M029914
  • GC06M029930
  • GC06M029942
  • GC06M029949
  • GC06M029960
  • GC06M029946
  • GC06M030035
  • GC06M030050
  • GC06M030061
  • GC06M030174
  • GC06M030212
  • GC06M030270
  • GC06M030303

Summaries for HCG4P5 Gene

GeneCards Summary for HCG4P5 Gene

HCG4P5 (HLA Complex Group 4 Pseudogene 5) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for HCG4P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG4P5 Gene

Genomics for HCG4P5 Gene

GeneHancer (GH) Regulatory Elements for HCG4P5 Gene

Promoters and enhancers for HCG4P5 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J029940 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 674.9 -0.5 -460 3.7 HDGF PKNOX1 SMAD1 ARID4B DMAP1 ZNF2 YY1 GLIS2 ZNF143 ATF7 HLA-A HCG4P5 PIR61557 HLA-J HLA-T HLA-G HLA-H HLA-W HLA-K ZNRD1
GH06J029963 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 20.7 -24.4 -24448 4.8 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 HLA-A HLA-K HCG4P3 ZNRD1 HLA-W TRIM39 HLA-H PPP1R10 MDC1 DHX16
GH06J029751 Promoter/Enhancer 1.6 Ensembl ENCODE 23 +189.0 188958 2 PKNOX1 ARNT ZFP64 ARID4B SIN3A ZNF2 YY1 POLR2B ZNF766 CBX5 IFITM4P ENSG00000272236 RPL23AP1 MDC1 HCG4P5 ZNF311 ZNRD1ASP ZFP57 MICE HLA-A
GH06J029722 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 21.7 +217.2 217218 4.1 SMAD1 GLIS2 ZNF207 ZNF143 FOS NFYC REST NBN KDM1A HNF4A HLA-F HLA-J ZFP57 ZNRD1 HLA-H HCG4P5 IFITM4P HLA-F-AS1 DHX16 MICE
GH06J029747 Promoter/Enhancer 1.5 Ensembl ENCODE 23 +192.9 192920 1.9 PKNOX1 SIN3A DMAP1 GLI4 ZNF48 YY1 GLIS2 ZNF207 FOS ATF7 MICE ENSG00000199290 GC06P031464 GC06P032274 HCG9P5 HLA-F-AS1 RPL23AP1 HCG4P5 HLA-A ZNRD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HCG4P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HCG4P5 Gene

Genomic Locations for HCG4P5 Gene
890 bases
Minus strand
890 bases
Minus strand

Genomic View for HCG4P5 Gene

Genes around HCG4P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HCG4P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HCG4P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HCG4P5 Gene

Function for HCG4P5 Gene

Phenotypes From GWAS Catalog for HCG4P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HCG4P5 Gene

Localization for HCG4P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HCG4P5 Gene

Pathways & Interactions for HCG4P5 Gene

SuperPathways for HCG4P5 Gene

No Data Available

Interacting Proteins for HCG4P5 Gene

Gene Ontology (GO) - Biological Process for HCG4P5 Gene


No data available for Pathways by source and SIGNOR curated interactions for HCG4P5 Gene

Drugs & Compounds for HCG4P5 Gene

No Compound Related Data Available

Transcripts for HCG4P5 Gene

mRNA/cDNA for HCG4P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HCG4P5 Gene

No ASD Table

Relevant External Links for HCG4P5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HCG4P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HCG4P5 Gene

mRNA differential expression in normal tissues according to GTEx for HCG4P5 Gene

This gene is overexpressed in Whole Blood (x11.3).

NURSA nuclear receptor signaling pathways regulating expression of HCG4P5 Gene:

genes like me logo Genes that share expression patterns with HCG4P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HCG4P5 Gene

Orthologs for HCG4P5 Gene

Evolution for HCG4P5 Gene

Gene Tree for HCG4P5 (if available)
Gene Tree for HCG4P5 (if available)

No data available for Orthologs for HCG4P5 Gene

Paralogs for HCG4P5 Gene

No data available for Paralogs for HCG4P5 Gene

Variants for HCG4P5 Gene

Additional Variant Information for HCG4P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HCG4P5 Gene

Disorders for HCG4P5 Gene

No disorders were found for HCG4P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HCG4P5 Gene

Publications for HCG4P5 Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 2 3 58

Products for HCG4P5 Gene

Sources for HCG4P5 Gene

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