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Aliases for HCG4P4 Gene

Aliases for HCG4P4 Gene

  • HLA Complex Group 4 Pseudogene 4 2 3
  • HCGIV-04 Pseudogene 2 3
  • HCGIV-04 3
  • HCGIV-4 3
  • HCGIV.3 3

External Ids for HCG4P4 Gene

Previous GeneCards Identifiers for HCG4P4 Gene

  • GC00U913607
  • GC06M030028
  • GC06M030030
  • GC06M029923
  • GC06M029925
  • GC06M029926
  • GC06M029935
  • GC06M030020

Summaries for HCG4P4 Gene

GeneCards Summary for HCG4P4 Gene

HCG4P4 (HLA Complex Group 4 Pseudogene 4) is a Pseudogene.

Additional gene information for HCG4P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG4P4 Gene

Genomics for HCG4P4 Gene

GeneHancer (GH) Regulatory Elements for HCG4P4 Gene

Promoters and enhancers for HCG4P4 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J029955 Enhancer 0.2 Ensembl 600.7 +0.0 32 0.4 HCG4P4 HLA-W HLA-J HLA-T HLA-G HLA-A HLA-K ZFP57 ENSG00000227766 ENSG00000237669
GH06J029940 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.4 +12.3 12338 5.8 SP1 NKRF POLR2A ZNF687 ZSCAN21 ZBTB7A YY1 RELA CREM PRDM1 ENSG00000227766 HCG4P5 PIR61557 HLA-J HLA-T HLA-G HLA-H HLA-A HLA-W HLA-K
GH06J029952 Enhancer 0.7 Ensembl ENCODE 0.7 +2.0 2032 2 MZF1 SP1 FOSL1 FOSL2 JUN ADNP JUND HLA-J HLA-T HLA-K HLA-A ENSG00000227766 HLA-G ZFP57 MICD ENSG00000237669 HLA-H
GH06J029947 Enhancer 0.7 ENCODE dbSUPER 0.4 +8.1 8114 0.2 ZBED1 POLR2A BACH1 NFATC1 CBFA2T3 HLA-J HLA-T HLA-A HLA-H ENSG00000227766 HCG4P4
GH06J029948 Enhancer 0.5 ENCODE dbSUPER 0.4 +8.6 8590 0.1 POLR2A HLA-G ENSG00000237669 HLA-K ENSG00000227766 HCG4P4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HCG4P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HCG4P4 Gene

Genomic Locations for HCG4P4 Gene
429 bases
Minus strand
429 bases
Minus strand

Genomic View for HCG4P4 Gene

Genes around HCG4P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HCG4P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HCG4P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HCG4P4 Gene

Proteins for HCG4P4 Gene

Post-translational modifications for HCG4P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HCG4P4 Gene

Domains & Families for HCG4P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HCG4P4 Gene

Function for HCG4P4 Gene

Phenotypes From GWAS Catalog for HCG4P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HCG4P4 Gene

Localization for HCG4P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HCG4P4 Gene

Pathways & Interactions for HCG4P4 Gene

PathCards logo

SuperPathways for HCG4P4 Gene

No Data Available

Interacting Proteins for HCG4P4 Gene

Gene Ontology (GO) - Biological Process for HCG4P4 Gene


No data available for Pathways by source and SIGNOR curated interactions for HCG4P4 Gene

Drugs & Compounds for HCG4P4 Gene

No Compound Related Data Available

Transcripts for HCG4P4 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HCG4P4 Gene

No ASD Table

Relevant External Links for HCG4P4 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for HCG4P4 Gene

Expression for HCG4P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of HCG4P4 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HCG4P4 Gene

Orthologs for HCG4P4 Gene

No data available for Orthologs and Evolution for HCG4P4 Gene

Paralogs for HCG4P4 Gene

No data available for Paralogs for HCG4P4 Gene

Variants for HCG4P4 Gene

Additional Variant Information for HCG4P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HCG4P4 Gene

Disorders for HCG4P4 Gene

No disorders were found for HCG4P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HCG4P4 Gene

Publications for HCG4P4 Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 2 3 58

Products for HCG4P4 Gene

Sources for HCG4P4 Gene

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