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Aliases for HCG14 Gene

Subcategory (RNA class) for HCG14 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for HCG14 Gene

  • HLA Complex Group 14 2 3 5
  • HLA Complex Group 14 (Non-Protein Coding) 2 3
  • DJ111M5.4 3

External Ids for HCG14 Gene

Previous GeneCards Identifiers for HCG14 Gene

  • GC00U915689
  • GC06U900749
  • GC06P028865

Summaries for HCG14 Gene

GeneCards Summary for HCG14 Gene

HCG14 (HLA Complex Group 14) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for HCG14 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HCG14 Gene

Genomics for HCG14 Gene

GeneHancer (GH) Regulatory Elements for HCG14 Gene

Promoters and enhancers for HCG14 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HCG14 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HCG14 Gene

Genomic Locations for HCG14 Gene
793 bases
Plus strand
793 bases
Plus strand

Genomic View for HCG14 Gene

Genes around HCG14 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HCG14 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HCG14 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HCG14 Gene

No data available for DME Specific Peptides for HCG14 Gene

Domains & Families for HCG14 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HCG14 Gene

Function for HCG14 Gene

Phenotypes From GWAS Catalog for HCG14 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HCG14 Gene

Localization for HCG14 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HCG14 Gene

Pathways & Interactions for HCG14 Gene

PathCards logo

SuperPathways for HCG14 Gene

No Data Available

Interacting Proteins for HCG14 Gene

Gene Ontology (GO) - Biological Process for HCG14 Gene


No data available for Pathways by source and SIGNOR curated interactions for HCG14 Gene

Drugs & Compounds for HCG14 Gene

No Compound Related Data Available

Transcripts for HCG14 Gene

mRNA/cDNA for HCG14 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HCG14 Gene

No ASD Table

Relevant External Links for HCG14 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HCG14 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HCG14 Gene

mRNA differential expression in normal tissues according to GTEx for HCG14 Gene

This gene is overexpressed in Testis (x5.9).

NURSA nuclear receptor signaling pathways regulating expression of HCG14 Gene:

genes like me logo Genes that share expression patterns with HCG14: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HCG14 Gene

Orthologs for HCG14 Gene

Evolution for HCG14 Gene

Gene Tree for HCG14 (if available)
Gene Tree for HCG14 (if available)

No data available for Orthologs for HCG14 Gene

Paralogs for HCG14 Gene

No data available for Paralogs for HCG14 Gene

Variants for HCG14 Gene

Sequence variations from dbSNP and Humsavar for HCG14 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000199052 -- 28,896,298(+) C/T upstream_transcript_variant
rs1000227521 -- 28,896,246(+) A/G upstream_transcript_variant
rs1000385742 -- 28,894,538(+) C/G upstream_transcript_variant
rs1000530737 -- 28,897,311(+) A/G non_coding_transcript_variant
rs1000561840 -- 28,896,979(+) C/A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for HCG14 Gene

Variant ID Type Subtype PubMed ID
esv3608464 CNV gain 21293372
nsv1074388 CNV deletion 25765185
nsv1122126 CNV deletion 24896259
nsv1145096 CNV deletion 24896259
nsv462667 CNV gain 19166990
nsv510021 OTHER sequence alteration 20534489
nsv601212 CNV gain 21841781
nsv830622 CNV gain 17160897

Additional Variant Information for HCG14 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HCG14 Gene

Disorders for HCG14 Gene

Additional Disease Information for HCG14

No disorders were found for HCG14 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HCG14 Gene

Publications for HCG14 Gene

  1. Celiac Diasease-associated lncRNA Named HCG14 Regulates NOD1 Expression in Intestinal Cells. (PMID: 29601440) Santin I … Bilbao JR (Journal of pediatric gastroenterology and nutrition 2018) 2 3 58

Products for HCG14 Gene

Sources for HCG14 Gene

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