Aliases for HADHAP1 Gene

Aliases for HADHAP1 Gene

  • HADHA Pseudogene 1 2 3 5
  • Hydroxyacyl-Coenzyme A Dehydrogenase/3-Ketoacyl-Coenzyme A Thiolase/Enoyl-Coenzyme A Hydratase Pseudogene (Gastrin Binding Protein Pseudogene) 2 3
  • Hydroxyacyl-CoA Dehydrogenase/3-Ketoacyl-CoA Thiolase/Enoyl-CoA Hydratase Pseudogene (Gastrin Binding Protein Pseudogene) 2 3
  • Hydroxyacyl-Coenzyme A Dehydrogenase/3-Ketoacyl-Coenzyme A Thiolase/Enoyl-Coenzyme A Hydratase (Trifunctional Protein), Alpha Subunit Pseudogene 3
  • Hydroxyacyl-CoA Dehydrogenase/3-Ketoacyl-CoA Thiolase/Enoyl-CoA Hydratase (Trifunctional Protein), Alpha Subunit Pseudogene 1 3
  • Gastrin Binding Protein Pseudogene 3
  • HADHAP1 5
  • HADHAP 3

External Ids for HADHAP1 Gene

Previous HGNC Symbols for HADHAP1 Gene

  • HADHAP

Previous GeneCards Identifiers for HADHAP1 Gene

  • GC04M166324
  • GC04M162076

Summaries for HADHAP1 Gene

GeneCards Summary for HADHAP1 Gene

HADHAP1 (HADHA Pseudogene 1) is a Pseudogene.

Additional gene information for HADHAP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HADHAP1 Gene

Genomics for HADHAP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HADHAP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J165439 Enhancer 1.2 FANTOM5 Ensembl ENCODE 7 -33.8 -33817 2.8 CREB1 PRDM10 ZNF629 ZNF692 ZIC2 ZSCAN4 PATZ1 ZNF341 ATF7 ZNF561 CPE MIR578 HADHAP1 FAM218A RF00017-4449 TLL1
GH04J165398 Enhancer 0.7 FANTOM5 Ensembl 7.3 +7.9 7859 1 RFX1 RFX5 POLR2A PKNOX1 BMI1 ZNF2 SMARCA4 ZNF384 RFXANK DACH1 CPE HADHAP1 KY994054-047 MIR578 TLL1
GH04J165410 Enhancer 0.2 FANTOM5 0.7 -4.0 -3961 0.2 MSMO1 CPE FAM218A HADHAP1 RF00017-4449 TLL1
GH04J165432 Enhancer 0.4 Ensembl 0.3 -27.3 -27317 0.6 ZHX2 FOXA1 ZNF217 ZNF623 CPE HADHAP1 RF00017-4449 TLL1
GH04J165454 Enhancer 0.5 Ensembl 0.3 -48.2 -48217 0.4 CREB1 EGR1 FOS MEIS2 ATF2 CBFA2T3 NCOA3 RF00017-4449 HADHAP1 CPE TLL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HADHAP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HADHAP1 Gene

Genomic Locations for HADHAP1 Gene
chr4:165,403,687-165,406,384
(GRCh38/hg38)
Size:
2,698 bases
Orientation:
Minus strand
chr4:166,324,839-166,327,536
(GRCh37/hg19)
Size:
2,698 bases
Orientation:
Minus strand

Genomic View for HADHAP1 Gene

Genes around HADHAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HADHAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HADHAP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HADHAP1 Gene

Proteins for HADHAP1 Gene

Post-translational modifications for HADHAP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HADHAP1 Gene

Domains & Families for HADHAP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HADHAP1 Gene

Function for HADHAP1 Gene

Phenotypes From GWAS Catalog for HADHAP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HADHAP1 Gene

Localization for HADHAP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HADHAP1 Gene

Pathways & Interactions for HADHAP1 Gene

PathCards logo

SuperPathways for HADHAP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HADHAP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HADHAP1 Gene

Drugs & Compounds for HADHAP1 Gene

No Compound Related Data Available

Transcripts for HADHAP1 Gene

mRNA/cDNA for HADHAP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HADHAP1 Gene

No ASD Table

Relevant External Links for HADHAP1 Gene

GeneLoc Exon Structure for
HADHAP1

Expression for HADHAP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HADHAP1 Gene

mRNA differential expression in normal tissues according to GTEx for HADHAP1 Gene

This gene is overexpressed in Prostate (x16.0) and Pituitary (x9.1).
genes like me logo Genes that share expression patterns with HADHAP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HADHAP1 Gene

Orthologs for HADHAP1 Gene

Evolution for HADHAP1 Gene

ENSEMBL:
Gene Tree for HADHAP1 (if available)
TreeFam:
Gene Tree for HADHAP1 (if available)

No data available for Orthologs for HADHAP1 Gene

Paralogs for HADHAP1 Gene

No data available for Paralogs for HADHAP1 Gene

Variants for HADHAP1 Gene

Additional Variant Information for HADHAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HADHAP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HADHAP1 Gene

Disorders for HADHAP1 Gene

Additional Disease Information for HADHAP1

Genetic Association Database
(GAD)

No disorders were found for HADHAP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HADHAP1 Gene

Publications for HADHAP1 Gene

  1. Structures of the human cDNA and gene encoding the 78 kDa gastrin-binding protein and of a related pseudogene. (PMID: 7918661) Zhang QX … Baldwin GS (Biochimica et biophysica acta 1994) 2 3
  2. Characterization and peripheral blood biomarker assessment of anti-Jo-1 antibody-positive interstitial lung disease. (PMID: 19565490) Richards TJ … Ascherman DP (Arthritis and rheumatism 2009) 3
  3. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta KL … Murabito JM (BMC medical genetics 2007) 41
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 41

Products for HADHAP1 Gene

Sources for HADHAP1 Gene