Aliases for H3P42 Gene

Aliases for H3P42 Gene

  • H3 Histone Pseudogene 42 2 3 5
  • P52 2 3
  • H3P42 5

External Ids for H3P42 Gene

Previous GeneCards Identifiers for H3P42 Gene

  • GC17U902878

Summaries for H3P42 Gene

GeneCards Summary for H3P42 Gene

H3P42 (H3 Histone Pseudogene 42) is a Pseudogene.

Additional gene information for H3P42 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for H3P42 Gene

Genomics for H3P42 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for H3P42 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J060311 Enhancer 0.8 Ensembl 600.7 -0.2 -233 7.2 CTCF KDM1A JUND FOXA1 PKNOX1 MTA1 REST ZNF24 IKZF2 HDAC1 H3P42 lnc-C17orf64-1 HEATR6 SCARNA20 C17orf64 USP32 ENSG00000275860 piR-38580-119 CA4
GH17J060321 Enhancer 0.6 Ensembl 0.4 +5.9 5867 1.8 TCF12 IKZF2 SP1 SCRT2 YY1 ZBTB33 JUND NFXL1 IKZF1 NR2F1 C17orf64 USP32 HEATR6 H3P42 lnc-C17orf64-1 piR-55194-162 CA4
GH17J060309 Enhancer 0.6 Ensembl 0.4 -5.5 -5534 2.2 ATF7 ZNF629 CEBPB ATF2 ZNF366 ZNF146 ATF3 PRDM6 JUND JUN piR-38580-119 HEATR6 SCARNA20 H3P42 lnc-C17orf64-1 C17orf64 USP32 CA4
GH17J060333 Enhancer 0.5 Ensembl 0.4 +17.5 17467 1.8 PRDM1 BCLAF1 NFXL1 ZNF366 PRDM6 ZSCAN21 C17orf64 USP32 ENSG00000275860 piR-55194-162 H3P42 lnc-C17orf64-1 CA4
GH17J060325 Enhancer 0.4 Ensembl 0.4 +9.9 9866 0.6 FOXA2 HNF4A ZNF384 HEATR6 H3P42 lnc-C17orf64-1 piR-55194-162 C17orf64 USP32 CA4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H3P42 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for H3P42 Gene

Genomic Locations for H3P42 Gene
chr17:60,315,834-60,316,215
(GRCh38/hg38)
Size:
382 bases
Orientation:
Plus strand
chr17:58,393,195-58,393,576
(GRCh37/hg19)
Size:
382 bases
Orientation:
Plus strand

Genomic View for H3P42 Gene

Genes around H3P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H3P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H3P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H3P42 Gene

Proteins for H3P42 Gene

No data available for DME Specific Peptides for H3P42 Gene

Domains & Families for H3P42 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for H3P42 Gene

Function for H3P42 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H3P42 Gene

Localization for H3P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H3P42 Gene

Pathways & Interactions for H3P42 Gene

PathCards logo

SuperPathways for H3P42 Gene

No Data Available

Gene Ontology (GO) - Biological Process for H3P42 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for H3P42 Gene

Drugs & Compounds for H3P42 Gene

No Compound Related Data Available

Transcripts for H3P42 Gene

mRNA/cDNA for H3P42 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for H3P42 Gene

No ASD Table

Relevant External Links for H3P42 Gene

GeneLoc Exon Structure for
H3P42

Expression for H3P42 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H3P42 Gene

Orthologs for H3P42 Gene

Evolution for H3P42 Gene

ENSEMBL:
Gene Tree for H3P42 (if available)
TreeFam:
Gene Tree for H3P42 (if available)

No data available for Orthologs for H3P42 Gene

Paralogs for H3P42 Gene

No data available for Paralogs for H3P42 Gene

Variants for H3P42 Gene

Additional Variant Information for H3P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H3P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H3P42 Gene

Disorders for H3P42 Gene

No disorders were found for H3P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H3P42 Gene

Publications for H3P42 Gene

  1. The human histone H3 complement anno 2011. (PMID: 21782046) Ederveen TH … Logie C (Biochimica et biophysica acta 2011) 2 3

No data available for Mastermind for H3P42 Gene

Products for H3P42 Gene

Sources for H3P42 Gene