Aliases for H3-3A-DT Gene

Data sources for H3-3A-DT Gene:

RNA type for H3-3A-DT Gene

lncRNA

Aliases for H3-3A-DT Gene

External Ids for H3-3A-DT Gene

Summaries for H3-3A-DT Gene

GeneCards Summary for H3-3A-DT Gene

H3-3A-DT (H3-3A Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for H3-3A-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for H3-3A-DT Gene

Genomics for H3-3A-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for H3-3A-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H3-3A-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for H3-3A-DT Gene

Latest Assembly
chr1:226,044,024-226,062,511
(GRCh38/hg38)
Size:
18,488 bases
Orientation:
Minus strand

Previous Assembly
chr1:226,248,413-226,249,577
(GRCh37/hg19 by Ensembl)
Size:
1,165 bases
Orientation:
Minus strand

Genomic View for H3-3A-DT Gene

Genes around H3-3A-DT on UCSC Golden Path with GeneCards custom track
H3-3A-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
H3-3A-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H3-3A-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for H3-3A-DT Gene

Proteins for H3-3A-DT Gene

Post-translational modifications for H3-3A-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for H3-3A-DT Gene

Domains & Families for H3-3A-DT Gene

Gene Families for H3-3A-DT Gene

genes like me logo Genes that share domains with H3-3A-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for H3-3A-DT Gene

Function for H3-3A-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H3-3A-DT Gene

Localization for H3-3A-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H3-3A-DT Gene

Pathways & Interactions for H3-3A-DT Gene

PathCards logo

SuperPathways for H3-3A-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for H3-3A-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for H3-3A-DT Gene

Drugs & Compounds for H3-3A-DT Gene

No Compound Related Data Available

Transcripts for H3-3A-DT Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for H3-3A-DT Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000032D204_9606 lncRNA 490 3

Ensembl: ENST00000609423 (view in UCSC) ,

LNCipedia: lnc-SDE2-1:14,

NONCODE: NONHSAT153044.1,

URS0000EED87A_9606 lncRNA 1264 1

Ensembl: ENST00000658138 (view in UCSC) ,

URS00008B8D6B_9606 lncRNA 361 3

LncBook: HSALNT0023030,

LNCipedia: lnc-SDE2-1:1,

NONCODE: NONHSAT009870.2,

URS0000D57A48_9606 lncRNA 3977 2

LncBook: HSALNT0023028,

LNCipedia: lnc-SDE2-1:4,

URS00008B8828_9606 lncRNA 3778 2

LNCipedia: lnc-SDE2-1:15,

NONCODE: NONHSAT009869.2,

H3-3A-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for H3-3A-DT Gene

No ASD Table

Relevant External Links for H3-3A-DT Gene

GeneLoc Exon Structure for
H3-3A-DT

No data available for mRNA/cDNA for H3-3A-DT Gene

Expression for H3-3A-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H3-3A-DT Gene

Orthologs for H3-3A-DT Gene

Evolution for H3-3A-DT Gene

ENSEMBL:
Gene Tree for H3-3A-DT (if available)
TreeFam:
Gene Tree for H3-3A-DT (if available)
Alliance of Genome Resources:
Additional Orthologs for H3-3A-DT

No data available for Orthologs for H3-3A-DT Gene

Paralogs for H3-3A-DT Gene

No data available for Paralogs for H3-3A-DT Gene

Variants for H3-3A-DT Gene

Additional Variant Information for H3-3A-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H3-3A-DT
Leiden Open Variation Database (LOVD)
H3-3A-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H3-3A-DT Gene

Disorders for H3-3A-DT Gene

Additional Disease Information for H3-3A-DT

Open Targets Platform
Open Targets Platform

No disorders were found for H3-3A-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for H3-3A-DT Gene

Publications for H3-3A-DT Gene

No publications were found for H3-3A-DT Gene.

No data available for Mastermind for H3-3A-DT Gene

Products for H3-3A-DT Gene

Sources for H3-3A-DT Gene