H2BP5 Gene (Pseudogene)

H2B Histone Pseudogene 5

GC06P025886
GIFtS:
4
See more...

Aliases for H2BP5 Gene

Aliases for H2BP5 Gene

  • H2B Histone Pseudogene 5 2 3 5
  • H2BP5 5

External Ids for H2BP5 Gene

Previous GeneCards Identifiers for H2BP5 Gene

  • GC06U903803

Summaries for H2BP5 Gene

GeneCards Summary for H2BP5 Gene

H2BP5 (H2B Histone Pseudogene 5) is a Pseudogene.

Additional gene information for H2BP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for H2BP5 Gene

Genomics for H2BP5 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for H2BP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J025884 Enhancer 0.8 Ensembl ENCODE 600.7 -1.3 -1318 1 SP1 CEBPA CEBPB FOXA2 NR3C1 ATF3 YY1 GABPA ZBTB33 JUND SLC17A3 H2AC3P H2BP5 ENSG00000272462 BTN3A2 SLC17A2 RF00017-5376
GH06J025898 Enhancer 1 Ensembl ENCODE 0.4 +14.0 13999 2.4 GATAD2A TEAD4 TFE3 NFKBIZ RCOR2 RXRB SP1 CEBPA SOX13 TCF7 BTN2A2 BTN3A1 SLC17A4 ENSG00000272462 H1-2 NONHSAG043220.2 H2BP5 SLC17A3 SLC17A2 RF00017-5376
GH06J025890 Enhancer 0.8 Ensembl 0.4 +5.2 5222 0.5 GATAD2A CTCF RXRB REST RAD21 IRF2 ZNF600 CEBPA SOX13 ZKSCAN8 ENSG00000272462 SLC17A4 SLC17A1 RPL21P68 BTN3A2 H2BP5 SLC17A3 NONHSAG043220.2 SLC17A2 RF00017-5376
GH06J025902 Enhancer 0.2 Ensembl 0.4 +16.9 16882 0.2 ENSG00000272462 SLC17A3 SLC17A4 NONHSAG043220.2 H2BP5 SLC17A2 RF00017-5376
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H2BP5 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for H2BP5 Gene

Genomic Locations for H2BP5 Gene
chr6:25,885,419-25,885,751
(GRCh38/hg38)
Size:
333 bases
Orientation:
Plus strand

Genomic View for H2BP5 Gene

Genes around H2BP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H2BP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H2BP5 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for H2BP5 Gene

Proteins for H2BP5 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

No data available for DME Specific Peptides for H2BP5 Gene

Domains & Families for H2BP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for H2BP5 Gene

Function for H2BP5 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for H2BP5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H2BP5 Gene

Localization for H2BP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H2BP5 Gene

Pathways & Interactions for H2BP5 Gene

PathCards logo

SuperPathways for H2BP5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for H2BP5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for H2BP5 Gene

Drugs & Compounds for H2BP5 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for H2BP5 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for H2BP5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for H2BP5 Gene

No ASD Table

Relevant External Links for H2BP5 Gene

GeneLoc Exon Structure for
H2BP5

Expression for H2BP5 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H2BP5 Gene

Orthologs for H2BP5 Gene

Evolution for H2BP5 Gene

ENSEMBL:
Gene Tree for H2BP5 (if available)
TreeFam:
Gene Tree for H2BP5 (if available)

No data available for Orthologs for H2BP5 Gene

Paralogs for H2BP5 Gene

No data available for Paralogs for H2BP5 Gene

Variants for H2BP5 Gene

Additional Variant Information for H2BP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H2BP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H2BP5 Gene

Disorders for H2BP5 Gene

No disorders were found for H2BP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H2BP5 Gene

Publications for H2BP5 Gene

No publications were found for H2BP5 Gene.

No data available for Mastermind for H2BP5 Gene

Products for H2BP5 Gene

Sources for H2BP5 Gene