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Aliases for H2BFXP Gene

Aliases for H2BFXP Gene

  • H2B Histone Family Member X, Pseudogene 2 3
  • H2B Histone Family, Member X, Pseudogene 2

External Ids for H2BFXP Gene

Previous GeneCards Identifiers for H2BFXP Gene

  • GC0XU900832
  • GC0XP103119
  • GC0XP103231
  • GC0XP092885

Summaries for H2BFXP Gene

GeneCards Summary for H2BFXP Gene

H2BFXP (H2B Histone Family Member X, Pseudogene) is a Pseudogene.

Additional gene information for H2BFXP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H2BFXP Gene

Genomics for H2BFXP Gene

GeneHancer (GH) Regulatory Elements for H2BFXP Gene

Promoters and enhancers for H2BFXP Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ103962 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.4 -13.0 -13023 2.2 SP1 POLR2A ZBTB8A ZNF600 GTF2F1 ZFX SP2 ZSCAN29 ESRRA ELF1 DPPA3P1 GC0XM103962 TMSB15B FAM199X SLC25A53 H2BFXP
GH0XJ103966 Enhancer 0.4 Ensembl 0.4 -9.6 -9623 0.6 IKZF1 IKZF2 ENSG00000235946 DPPA3P1 H2BFXP TMSB15B
GH0XJ103965 Enhancer 0.2 Ensembl 0.4 -10.3 -10323 0.4 DPPA3P1 H2BFXP TMSB15B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H2BFXP on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the H2BFXP gene promoter:
  • AP-4
  • Cart-1
  • GATA-1

Genomic Locations for H2BFXP Gene

Genomic Locations for H2BFXP Gene
2,434 bases
Plus strand
2,284 bases
Plus strand

Genomic View for H2BFXP Gene

Genes around H2BFXP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H2BFXP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H2BFXP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H2BFXP Gene

Proteins for H2BFXP Gene

Post-translational modifications for H2BFXP Gene

No Post-translational modifications

No data available for DME Specific Peptides for H2BFXP Gene

Domains & Families for H2BFXP Gene

Gene Families for H2BFXP Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with H2BFXP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H2BFXP Gene

Function for H2BFXP Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H2BFXP Gene

Localization for H2BFXP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H2BFXP Gene

Pathways & Interactions for H2BFXP Gene

PathCards logo

SuperPathways for H2BFXP Gene

No Data Available

Interacting Proteins for H2BFXP Gene

Gene Ontology (GO) - Biological Process for H2BFXP Gene


No data available for Pathways by source and SIGNOR curated interactions for H2BFXP Gene

Drugs & Compounds for H2BFXP Gene

No Compound Related Data Available

Transcripts for H2BFXP Gene

mRNA/cDNA for H2BFXP Gene

(2) Additional mRNA sequences :

Unigene Clusters for H2BFXP Gene

H2B histone family, member X, pseudogene:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for H2BFXP Gene

No ASD Table

Relevant External Links for H2BFXP Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for H2BFXP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for H2BFXP Gene

mRNA differential expression in normal tissues according to GTEx for H2BFXP Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x9.3) and Brain - Cerebellum (x8.7).

NURSA nuclear receptor signaling pathways regulating expression of H2BFXP Gene:


SOURCE GeneReport for Unigene cluster for H2BFXP Gene:

genes like me logo Genes that share expression patterns with H2BFXP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H2BFXP Gene

Orthologs for H2BFXP Gene

No data available for Orthologs and Evolution for H2BFXP Gene

Paralogs for H2BFXP Gene

No data available for Paralogs for H2BFXP Gene

Variants for H2BFXP Gene

Sequence variations from dbSNP and Humsavar for H2BFXP Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs112004169 -- 103,974,520(+) C/T upstream_transcript_variant
rs113384073 -- 103,974,531(+) G/A upstream_transcript_variant
rs1160221481 -- 103,974,909(+) T/A upstream_transcript_variant
rs1173041373 -- 103,975,829(+) A/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for H2BFXP Gene

Variant ID Type Subtype PubMed ID
dgv2355e212 CNV gain 25503493
dgv5n1 OTHER inversion 15895083
esv1007027 OTHER inversion 20482838
esv2758880 CNV gain 17122850
esv3577013 CNV gain 25503493
esv3577033 CNV gain 25503493
nsv1129090 CNV duplication 24896259
nsv208 OTHER inversion 15895083
nsv469772 CNV gain 16826518
nsv519626 CNV gain 19592680
nsv7453 OTHER inversion 18451855

Additional Variant Information for H2BFXP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for H2BFXP Gene

Disorders for H2BFXP Gene

Additional Disease Information for H2BFXP

No disorders were found for H2BFXP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for H2BFXP Gene

Publications for H2BFXP Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for H2BFXP Gene

Sources for H2BFXP Gene

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