Aliases for H2AZP1 Gene

Aliases for H2AZP1 Gene

  • H2A.Z Histone Pseudogene 1 2 3 5
  • H2A Histone Family, Member Z, Pseudogene 2 3
  • H2A Histone Family Member Z Pseudogene 1 2 3
  • H2A Histone Family, Member Z Pseudogene 1 2
  • Histone H2AZ Pseudogene 3
  • H2AFZP1 3
  • H2AFZP 3
  • H2AZP1 5
  • GT334 3

External Ids for H2AZP1 Gene

Previous HGNC Symbols for H2AZP1 Gene

  • H2AFZP
  • H2AFZP1

Summaries for H2AZP1 Gene

GeneCards Summary for H2AZP1 Gene

H2AZP1 (H2A.Z Histone Pseudogene 1) is a Pseudogene.

Additional gene information for H2AZP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for H2AZP1 Gene

Genomics for H2AZP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for H2AZP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J044045 Enhancer 0.6 Ensembl dbSUPER 600.7 -0.4 -355 2.2 ZSCAN4 ZNF189 ZBTB33 H2AZP1 lnc-ICOSLG-11 TRAPPC10 PWP2 RF00017-3729
GH21J044048 Enhancer 0.5 Ensembl dbSUPER 600.7 -2.0 -1955 0.2 CTCF POLR2A H2AZP1 TRAPPC10 RF00017-3729 PWP2
GH21J044050 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 -4.2 -4158 3.8 ATF7 PRDM1 ZIC2 ZNF600 ATF2 CTCF GLIS1 JUND JUN POLR2A PWP2 TRAPPC10 H2AZP1 RF00017-3729
GH21J044064 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -18.4 -18394 2.5 SPI1 CEBPG ATF3 ZBTB33 POLR2A MAX EGR2 CREM PWP2 TRAPPC10 PFKL CFAP410 H2AZP1 RF00017-3729
GH21J044054 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -7.8 -7755 1.8 NR2F2 ZFHX2 EGR2 PWP2 H2AZP1 RF00017-3729 TRAPPC10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H2AZP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for H2AZP1 Gene

Genomic Locations for H2AZP1 Gene
chr21:44,045,979-44,047,146
(GRCh38/hg38)
Size:
1,168 bases
Orientation:
Minus strand
chr21:45,465,848-45,467,027
(GRCh37/hg19)
Size:
1,180 bases
Orientation:
Minus strand

Genomic View for H2AZP1 Gene

Genes around H2AZP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H2AZP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H2AZP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H2AZP1 Gene

Proteins for H2AZP1 Gene

Post-translational modifications for H2AZP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H2AZP1 Gene

Domains & Families for H2AZP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for H2AZP1 Gene

Function for H2AZP1 Gene

Phenotypes for H2AZP1 Gene

genes like me logo Genes that share phenotypes with H2AZP1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H2AZP1 Gene

Localization for H2AZP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H2AZP1 Gene

Pathways & Interactions for H2AZP1 Gene

PathCards logo

SuperPathways for H2AZP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for H2AZP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for H2AZP1 Gene

Drugs & Compounds for H2AZP1 Gene

No Compound Related Data Available

Transcripts for H2AZP1 Gene

mRNA/cDNA for H2AZP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for H2AZP1 Gene

No ASD Table

Relevant External Links for H2AZP1 Gene

GeneLoc Exon Structure for
H2AZP1

Expression for H2AZP1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H2AZP1 Gene

Orthologs for H2AZP1 Gene

Evolution for H2AZP1 Gene

ENSEMBL:
Gene Tree for H2AZP1 (if available)
TreeFam:
Gene Tree for H2AZP1 (if available)

No data available for Orthologs for H2AZP1 Gene

Paralogs for H2AZP1 Gene

No data available for Paralogs for H2AZP1 Gene

Variants for H2AZP1 Gene

Additional Variant Information for H2AZP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H2AZP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H2AZP1 Gene

Disorders for H2AZP1 Gene

No disorders were found for H2AZP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H2AZP1 Gene

Publications for H2AZP1 Gene

  1. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 3

Products for H2AZP1 Gene

Sources for H2AZP1 Gene