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Aliases for H2AFZP5 Gene

Subcategory (RNA class) for H2AFZP5 Gene

lncRNA

Aliases for H2AFZP5 Gene

  • H2A Histone Family Member Z Pseudogene 5 2 3 5
  • H2A Histone Family, Member Z Pseudogene 5 2

External Ids for H2AFZP5 Gene

ORGUL Members for H2AFZP5 Gene

Previous GeneCards Identifiers for H2AFZP5 Gene

  • GC10P079715
  • GC10P073708
  • GC10P079718
  • GC10P079882
  • GC10P080467
  • GC10P080752
  • GC10P081180

Summaries for H2AFZP5 Gene

GeneCards Summary for H2AFZP5 Gene

H2AFZP5 (H2A Histone Family Member Z Pseudogene 5) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for H2AFZP5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H2AFZP5 Gene

Genomics for H2AFZP5 Gene

GeneHancer (GH) Regulatory Elements for H2AFZP5 Gene

Promoters and enhancers for H2AFZP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J077955 Enhancer 0.4 ENCODE 600.7 +2.0 1979 0.9 ADNP GLIS1 H2AFZP5 DLG5-AS1 DLG5 RN7SL284P ENSG00000204049 ENSG00000274686
GH10J077953 Enhancer 0.2 Ensembl 600.7 +0.4 406 0.6 H2AFZP5 DLG5-AS1 DLG5 RN7SL284P ENSG00000204049 RPS24 ENSG00000274686
GH10J077948 Enhancer 0.9 Ensembl ENCODE 0.7 -4.1 -4106 2.3 ZNF548 SMARCA4 IKZF1 SMARCC1 CHD2 JUN SP1 RCOR1 POLR2A SMARCB1 DLG5 DLG5-AS1 RN7SL284P ENSG00000204049 RPS24 POLR3A H2AFZP5
GH10J077939 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.4 -13.3 -13341 2.3 ZFX ZKSCAN8 ZNF148 ZNF121 BACH1 TFE3 ZIC2 GTF2E2 ZNF24 SCRT2 DLG5 RN7SL284P ENSG00000204049 POLR3A RPS24 IMPDH1P5 ENSG00000213514 DLG5-AS1 H2AFZP5
GH10J077941 Enhancer 1.1 Ensembl ENCODE 0.4 -10.0 -9983 3.4 ZNF121 CEBPG ZNF384 ZSCAN21 MAFK TFE3 TRIM24 SP7 PRDM1 SMARCA4 DLG5 RN7SL284P ENSG00000204049 POLR3A RPS24 ENSG00000213514 H2AFZP5 DLG5-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H2AFZP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for H2AFZP5 Gene

Genomic Locations for H2AFZP5 Gene
chr10:77,953,495-77,953,882
(GRCh38/hg38)
Size:
388 bases
Orientation:
Plus strand
chr10:79,713,253-79,713,640
(GRCh37/hg19)
Size:
388 bases
Orientation:
Plus strand

Genomic View for H2AFZP5 Gene

Genes around H2AFZP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H2AFZP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H2AFZP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H2AFZP5 Gene

Proteins for H2AFZP5 Gene

Post-translational modifications for H2AFZP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H2AFZP5 Gene

Domains & Families for H2AFZP5 Gene

Gene Families for H2AFZP5 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with H2AFZP5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H2AFZP5 Gene

Function for H2AFZP5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H2AFZP5 Gene

Localization for H2AFZP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H2AFZP5 Gene

Pathways & Interactions for H2AFZP5 Gene

PathCards logo

SuperPathways for H2AFZP5 Gene

No Data Available

Interacting Proteins for H2AFZP5 Gene

Gene Ontology (GO) - Biological Process for H2AFZP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H2AFZP5 Gene

Drugs & Compounds for H2AFZP5 Gene

No Compound Related Data Available

Transcripts for H2AFZP5 Gene

mRNA/cDNA for H2AFZP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for H2AFZP5 Gene

No ASD Table

Relevant External Links for H2AFZP5 Gene

GeneLoc Exon Structure for
H2AFZP5
ECgene alternative splicing isoforms for
H2AFZP5

Expression for H2AFZP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for H2AFZP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of H2AFZP5 Gene:

H2AFZP5
genes like me logo Genes that share expression patterns with H2AFZP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H2AFZP5 Gene

Orthologs for H2AFZP5 Gene

Evolution for H2AFZP5 Gene

ENSEMBL:
Gene Tree for H2AFZP5 (if available)
TreeFam:
Gene Tree for H2AFZP5 (if available)

No data available for Orthologs for H2AFZP5 Gene

Paralogs for H2AFZP5 Gene

No data available for Paralogs for H2AFZP5 Gene

Variants for H2AFZP5 Gene

Additional Variant Information for H2AFZP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H2AFZP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H2AFZP5 Gene

Disorders for H2AFZP5 Gene

No disorders were found for H2AFZP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H2AFZP5 Gene

Publications for H2AFZP5 Gene

No publications were found for H2AFZP5 Gene.

No data available for External Links for H2AFZP5 Gene

Products for H2AFZP5 Gene

Sources for H2AFZP5 Gene

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