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Aliases for H2AFZP4 Gene

Subcategory (RNA class) for H2AFZP4 Gene

antisense

Aliases for H2AFZP4 Gene

  • H2A Histone Family Member Z Pseudogene 4 2 3 5
  • H2A Histone Family, Member Z Pseudogene 4 2

External Ids for H2AFZP4 Gene

ORGUL Members for H2AFZP4 Gene

Previous GeneCards Identifiers for H2AFZP4 Gene

  • GC00U930818
  • GC11U901715
  • GC11M070126

Summaries for H2AFZP4 Gene

GeneCards Summary for H2AFZP4 Gene

H2AFZP4 (H2A Histone Family Member Z Pseudogene 4) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for H2AFZP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H2AFZP4 Gene

Genomics for H2AFZP4 Gene

GeneHancer (GH) Regulatory Elements for H2AFZP4 Gene

Promoters and enhancers for H2AFZP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J070281 Enhancer 0.5 Ensembl ENCODE 600.7 -2.0 -1970 1.3 CTCF H2AFZP4 PPFIA1 MIR548K
GH11J070269 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 +8.5 8471 3.3 SP1 ZFX ZNF148 NKRF POLR2A GTF2F1 ZNF384 ZNF687 ZSCAN21 TFE3 PPFIA1 H2AFZP4
GH11J070282 Enhancer 0.2 Ensembl 0.7 -3.1 -3104 0.4 MIR548K PPFIA1 H2AFZP4 ENSG00000254604
GH11J070274 Enhancer 0.2 Ensembl 0.7 +4.4 4396 1 PPFIA1 H2AFZP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H2AFZP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for H2AFZP4 Gene

Genomic Locations for H2AFZP4 Gene
chr11:70,278,915-70,279,297
(GRCh38/hg38)
Size:
383 bases
Orientation:
Minus strand
chr11:70,125,021-70,125,403
(GRCh37/hg19)
Size:
383 bases
Orientation:
Minus strand

Genomic View for H2AFZP4 Gene

Genes around H2AFZP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H2AFZP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H2AFZP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H2AFZP4 Gene

Proteins for H2AFZP4 Gene

Post-translational modifications for H2AFZP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H2AFZP4 Gene

Domains & Families for H2AFZP4 Gene

Gene Families for H2AFZP4 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with H2AFZP4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H2AFZP4 Gene

Function for H2AFZP4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H2AFZP4 Gene

Localization for H2AFZP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H2AFZP4 Gene

Pathways & Interactions for H2AFZP4 Gene

PathCards logo

SuperPathways for H2AFZP4 Gene

No Data Available

Interacting Proteins for H2AFZP4 Gene

Gene Ontology (GO) - Biological Process for H2AFZP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H2AFZP4 Gene

Drugs & Compounds for H2AFZP4 Gene

No Compound Related Data Available

Transcripts for H2AFZP4 Gene

mRNA/cDNA for H2AFZP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for H2AFZP4 Gene

No ASD Table

Relevant External Links for H2AFZP4 Gene

GeneLoc Exon Structure for
H2AFZP4
ECgene alternative splicing isoforms for
H2AFZP4

Expression for H2AFZP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for H2AFZP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of H2AFZP4 Gene:

H2AFZP4
genes like me logo Genes that share expression patterns with H2AFZP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H2AFZP4 Gene

Orthologs for H2AFZP4 Gene

Evolution for H2AFZP4 Gene

ENSEMBL:
Gene Tree for H2AFZP4 (if available)
TreeFam:
Gene Tree for H2AFZP4 (if available)

No data available for Orthologs for H2AFZP4 Gene

Paralogs for H2AFZP4 Gene

No data available for Paralogs for H2AFZP4 Gene

Variants for H2AFZP4 Gene

Additional Variant Information for H2AFZP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H2AFZP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H2AFZP4 Gene

Disorders for H2AFZP4 Gene

No disorders were found for H2AFZP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H2AFZP4 Gene

Publications for H2AFZP4 Gene

No publications were found for H2AFZP4 Gene.

No data available for External Links for H2AFZP4 Gene

Products for H2AFZP4 Gene

Sources for H2AFZP4 Gene

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