Free for academic non-profit institutions. Other users need a Commercial license

Aliases for H2AFVP1 Gene

Aliases for H2AFVP1 Gene

  • H2A Histone Family Member V Pseudogene 1 2 3 5
  • H2A Histone Family, Member V, Pseudogene 1 2
  • H2A Histone Family, Member V, Pseudogene 2
  • H2A Histone Family, Member V Pseudogene 3
  • HsT19970 3
  • H2AFVP 3

External Ids for H2AFVP1 Gene

Previous HGNC Symbols for H2AFVP1 Gene

  • H2AFVP

Previous GeneCards Identifiers for H2AFVP1 Gene

  • GC15M093276
  • GC15M092733
  • GC15M099041
  • GC15M096415
  • GC15M096672

Summaries for H2AFVP1 Gene

GeneCards Summary for H2AFVP1 Gene

H2AFVP1 (H2A Histone Family Member V Pseudogene 1) is a Pseudogene.

Additional gene information for H2AFVP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for H2AFVP1 Gene

Genomics for H2AFVP1 Gene

GeneHancer (GH) Regulatory Elements for H2AFVP1 Gene

Promoters and enhancers for H2AFVP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J092733 Promoter/Enhancer 1.3 Ensembl ENCODE 600.7 +0.2 175 1.8 CBFA2T2 ZNF121 ZSCAN21 IKZF1 ZNF600 PRDM10 IKZF2 ZNF512 ATF1 HDAC1 H2AFVP1 FAM174B ENSG00000272298
GH15J092735 Enhancer 0.3 Ensembl 600.7 -1.6 -1625 0.2 PRDM6 H2AFVP1 ENSG00000258562 LOC100652792 FAM174B
GH15J092723 Enhancer 0.5 Ensembl 5.8 +10.2 10175 1 TFE3 ZNF384 ATF2 NR2F6 ENSG00000272298 ST8SIA2 FAM174B H2AFVP1 RPL31P6
GH15J092746 Enhancer 0.9 Ensembl ENCODE 0.4 -11.7 -11705 0.8 CBFA2T2 NCOA3 CTBP1 FOXA2 NCOR1 DPF2 GATA3 HSF1 FOXA1 JUND FAM174B H2AFVP1 LOC100652792 ENSG00000258562
GH15J092742 Enhancer 0.6 Ensembl ENCODE 0.4 -9.0 -9014 1.8 SP1 HLF FAM174B H2AFVP1 LOC100652792 ENSG00000258562
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H2AFVP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for H2AFVP1 Gene

Genomic Locations for H2AFVP1 Gene
chr15:92,715,710-92,734,276
(GRCh38/hg38)
Size:
18,567 bases
Orientation:
Minus strand
chr15:93,276,901-93,277,506
(GRCh37/hg19)
Size:
606 bases
Orientation:
Minus strand

Genomic View for H2AFVP1 Gene

Genes around H2AFVP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H2AFVP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H2AFVP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for H2AFVP1 Gene

Proteins for H2AFVP1 Gene

Post-translational modifications for H2AFVP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for H2AFVP1 Gene

Domains & Families for H2AFVP1 Gene

Gene Families for H2AFVP1 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with H2AFVP1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for H2AFVP1 Gene

Function for H2AFVP1 Gene

Phenotypes for H2AFVP1 Gene

genes like me logo Genes that share phenotypes with H2AFVP1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H2AFVP1 Gene

Localization for H2AFVP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H2AFVP1 Gene

Pathways & Interactions for H2AFVP1 Gene

PathCards logo

SuperPathways for H2AFVP1 Gene

No Data Available

Interacting Proteins for H2AFVP1 Gene

Gene Ontology (GO) - Biological Process for H2AFVP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for H2AFVP1 Gene

Drugs & Compounds for H2AFVP1 Gene

No Compound Related Data Available

Transcripts for H2AFVP1 Gene

mRNA/cDNA for H2AFVP1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for H2AFVP1 Gene

No ASD Table

Relevant External Links for H2AFVP1 Gene

GeneLoc Exon Structure for
H2AFVP1
ECgene alternative splicing isoforms for
H2AFVP1

Expression for H2AFVP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of H2AFVP1 Gene:

H2AFVP1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H2AFVP1 Gene

Orthologs for H2AFVP1 Gene

Evolution for H2AFVP1 Gene

ENSEMBL:
Gene Tree for H2AFVP1 (if available)
TreeFam:
Gene Tree for H2AFVP1 (if available)

No data available for Orthologs for H2AFVP1 Gene

Paralogs for H2AFVP1 Gene

No data available for Paralogs for H2AFVP1 Gene

Variants for H2AFVP1 Gene

Additional Variant Information for H2AFVP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H2AFVP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H2AFVP1 Gene

Disorders for H2AFVP1 Gene

No disorders were found for H2AFVP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for H2AFVP1 Gene

Publications for H2AFVP1 Gene

No publications were found for H2AFVP1 Gene.

Products for H2AFVP1 Gene

Sources for H2AFVP1 Gene

Content
Loading form....