H2AC10P Gene (Pseudogene)

H2A Clustered Histone 10, Pseudogene

GC06M027313
GIFtS:
7
Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in ... See more...

Aliases for H2AC10P Gene

Aliases for H2AC10P Gene

  • H2A Clustered Histone 10, Pseudogene 2 3 5
  • H2A Histone Family, Member K, Pseudogene 2 3
  • Histone Cluster 1, H2a, Pseudogene 4 2 3
  • Histone Cluster 1 H2A Pseudogene 4 2 3
  • Histone 1, H2a, Pseudogene 4 2 3
  • DJ34B20.2 2 3
  • PH2A/K 2 3
  • HIST1H2APS4 3
  • H2AC10P 5
  • H2AFKP 3
  • H2A/K 3
  • H2AFK 3

External Ids for H2AC10P Gene

Previous HGNC Symbols for H2AC10P Gene

  • H2AFK
  • H2AFKP
  • HIST1H2APS4

Previous GeneCards Identifiers for H2AC10P Gene

  • GC06M026829
  • GC06M027053

Summaries for H2AC10P Gene

Entrez Gene Summary for H2AC10P Gene

  • Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This histone pseudogene is found in the large histone gene cluster on chromosome 6. [provided by RefSeq, Oct 2015]

GeneCards Summary for H2AC10P Gene

H2AC10P (H2A Clustered Histone 10, Pseudogene) is a Pseudogene.

Additional gene information for H2AC10P Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for H2AC10P Gene

Genomics for H2AC10P Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for H2AC10P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around H2AC10P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for H2AC10P Gene

Genomic Locations for H2AC10P Gene
chr6:26,272,021-26,272,701
(GRCh38/hg38)
Size:
681 bases
Orientation:
Minus strand
chr6:26,272,421-26,272,768
(GRCh37/hg19)
Size:
348 bases
Orientation:
Minus strand

Genomic View for H2AC10P Gene

Genes around H2AC10P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
H2AC10P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for H2AC10P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for H2AC10P Gene

Proteins for H2AC10P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for H2AC10P Gene

No Post-translational modifications

No data available for DME Specific Peptides for H2AC10P Gene

Domains & Families for H2AC10P Gene

Gene Families for H2AC10P Gene

HGNC:

Suggested Antigen Peptide Sequences for H2AC10P Gene

GenScript: Design optimal peptide antigens:
  • Histone H2A (Q92646_HUMAN)
genes like me logo Genes that share domains with H2AC10P: view

No data available for Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for H2AC10P Gene

Function for H2AC10P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for H2AC10P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for H2AC10P Gene

Localization for H2AC10P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for H2AC10P Gene

Pathways & Interactions for H2AC10P Gene

PathCards logo

SuperPathways for H2AC10P Gene

No Data Available

Gene Ontology (GO) - Biological Process for H2AC10P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for H2AC10P Gene

Drugs & Compounds for H2AC10P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for H2AC10P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for H2AC10P Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for H2AC10P Gene

No ASD Table

Relevant External Links for H2AC10P Gene

GeneLoc Exon Structure for
H2AC10P

Expression for H2AC10P Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for H2AC10P Gene

Orthologs for H2AC10P Gene

Evolution for H2AC10P Gene

ENSEMBL:
Gene Tree for H2AC10P (if available)
TreeFam:
Gene Tree for H2AC10P (if available)

No data available for Orthologs for H2AC10P Gene

Paralogs for H2AC10P Gene

No data available for Paralogs for H2AC10P Gene

Variants for H2AC10P Gene

Additional Variant Information for H2AC10P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
H2AC10P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for H2AC10P Gene

Disorders for H2AC10P Gene

Additional Disease Information for H2AC10P

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for H2AC10P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for H2AC10P Gene

Publications for H2AC10P Gene

  1. Human histone gene organization: nonregular arrangement within a large cluster. (PMID: 9119399) Albig W … Doenecke D (Genomics 1997) 2 3
  2. H2A/K pseudogene mutation may promote cell proliferation. (PMID: 26953487) Guo J … Yang JH (Mutation research 2016) 3

ExternalLinks

View latest publications for H2AC10P gene in Mastermind

Products for H2AC10P Gene

Sources for H2AC10P Gene